diff --git a/.github/workflows/test.yml b/.github/workflows/test.yml index 4bd0134..c973346 100644 --- a/.github/workflows/test.yml +++ b/.github/workflows/test.yml @@ -26,7 +26,10 @@ jobs: - name: Check dependencies for vulnerabilities run: | uv pip install pip-audit - uv run pip-audit + # Ignore CVEs with no fix available: + # - CVE-2026-34444 (lupa): transitive dep from pydocket→fakeredis[lua] + # - CVE-2026-3219 (pip): pip-audit's own dependency + uv run pip-audit --ignore-vuln CVE-2026-34444 --ignore-vuln CVE-2026-3219 - name: Run linting run: uv run ruff check diff --git a/.gitignore b/.gitignore index a89bec2..3bfbd8e 100644 --- a/.gitignore +++ b/.gitignore @@ -44,3 +44,6 @@ dist/ # Test reports report.html + +# Hypothesis (property-based testing) cache +.hypothesis/ diff --git a/pyproject.toml b/pyproject.toml index 91f99b6..f342ccf 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -18,13 +18,19 @@ classifiers = [ "Programming Language :: Python :: 3.13", ] dependencies = [ + "authlib>=1.6.11", # Security: CVE-2026-28802, CVE-2026-27962, CVE-2026-28490, GHSA-jj8c-mmj3-mmgv "click>=8.3.1", - "cryptography>=46.0.5", # Security fix: CVE-2026-26007 + "cryptography>=46.0.7", # Security: CVE-2026-34073, CVE-2026-39892 "fastapi>=0.115.0", "fastmcp>=3.2.0,<4", "pathspec>=1.0.3", - "pydocket>=0.17.2,<0.19", # Required by fastmcp 2.14.7 + "pydocket>=0.17.2,<0.19", # Required by fastmcp + "pygments>=2.20.0", # Security: CVE-2026-4539 + "pyjwt>=2.12.0", # Security: CVE-2026-32597 + "python-dotenv>=1.2.2", # Security: CVE-2026-28684 + "python-multipart>=0.0.26", # Security: CVE-2026-40347 "pyyaml>=6.0", + "requests>=2.33.0", # Security: CVE-2026-25645 "uvicorn>=0.30.0", ] @@ -38,7 +44,7 @@ dev = [ "asciidoc-linter @ git+https://github.com/docToolchain/asciidoc-linter.git", "hypothesis>=6.0.0", "pre-commit>=4.0.0", - "pytest>=8.0.0", + "pytest>=9.0.3", # Security: CVE-2025-71176 "pytest-asyncio>=0.24.0", "pytest-cov>=5.0.0", "pytest-html>=4.0.0", diff --git a/src/dacli/asciidoc_parser.py b/src/dacli/asciidoc_parser.py index 2a640dd..41513db 100644 --- a/src/dacli/asciidoc_parser.py +++ b/src/dacli/asciidoc_parser.py @@ -129,15 +129,17 @@ class AsciidocStructureParser: max_include_depth: Maximum depth for nested includes (default: 20) """ - def __init__(self, base_path: Path, max_include_depth: int = 20): + def __init__(self, base_path: Path, max_include_depth: int = 20, namespace: str | None = None): """Initialize the parser. Args: base_path: Base path for resolving relative file paths max_include_depth: Maximum depth for nested includes + namespace: Optional namespace prefix for multi-root mode (ADR-014) """ self.base_path = base_path self.max_include_depth = max_include_depth + self.namespace = namespace @staticmethod def scan_includes(file_path: Path) -> set[Path]: @@ -189,6 +191,9 @@ def _get_file_prefix(self, file_path: Path) -> str: The file prefix is the relative path from base_path to file_path, without the file extension. This ensures unique paths across documents. + In multi-root mode (ADR-014), the namespace is prepended with a colon + separator, producing paths like 'namespace:file/path:section'. + Issue #266: Only strips known extensions (.md, .adoc) to preserve dots in filenames (e.g. version numbers like "report_v1.2.3.adoc"). @@ -196,13 +201,16 @@ def _get_file_prefix(self, file_path: Path) -> str: file_path: Path to the document being parsed Returns: - Relative path without extension (e.g., "guides/installation") + Relative path without extension, optionally namespace-prefixed """ try: relative = file_path.relative_to(self.base_path) except ValueError: relative = Path(file_path.name) - return strip_doc_extension(relative) + prefix = strip_doc_extension(relative) + if self.namespace is not None: + return f"{self.namespace}:{prefix}" + return prefix def get_section(self, doc: AsciidocDocument, path: str) -> Section | None: """Get a section by its hierarchical path. diff --git a/src/dacli/cli.py b/src/dacli/cli.py index 280389b..2223a07 100644 --- a/src/dacli/cli.py +++ b/src/dacli/cli.py @@ -29,7 +29,9 @@ from dacli.asciidoc_parser import AsciidocStructureParser from dacli.file_handler import FileReadError, FileSystemHandler, FileWriteError from dacli.markdown_parser import MarkdownStructureParser -from dacli.index_builder import build_index +from dacli.index_builder import build_index, count_descendants, find_root_for_file +from dacli.models import DocumentRoot, detect_document_role +from dacli.root_config import RootConfigError, resolve_roots from dacli.services import ( compute_hash, get_project_metadata, @@ -140,11 +142,12 @@ def _get_section_append_line( "el": "elements", "val": "validate", "lv": "sections-at-level", + "ns": "namespaces", } # Command groups for organized help output (story-based ordering) COMMAND_GROUPS = { - "Discover": ["structure", "metadata"], + "Discover": ["namespaces", "structure", "metadata"], "Find": ["search", "sections-at-level"], "Read": ["section", "elements"], "Validate": ["validate"], @@ -265,14 +268,31 @@ class CliContext: def __init__( self, - docs_root: Path, - output_format: str, - pretty: bool, + roots: list[DocumentRoot] | Path | None = None, + output_format: str = "text", + pretty: bool = False, verbose: bool = False, respect_gitignore: bool = True, include_hidden: bool = False, + *, + docs_root: Path | None = None, ): - self.docs_root = docs_root + # Backward compat: accept docs_root kwarg or Path as first arg + if isinstance(roots, Path): + docs_root = roots + roots = None + if roots is None: + if docs_root is None: + docs_root = Path.cwd() + self.roots = [DocumentRoot( + name=docs_root.name, + path=docs_root.resolve(), + mode="workspace", + )] + else: + self.roots = roots + # Backward compat: first root is the primary docs_root + self.docs_root = self.roots[0].path self.output_format = output_format self.pretty = pretty self.verbose = verbose @@ -286,15 +306,11 @@ def __init__( self.index = StructureIndex() self.file_handler = FileSystemHandler() - self.asciidoc_parser = AsciidocStructureParser(base_path=docs_root) - self.markdown_parser = MarkdownStructureParser(base_path=docs_root) - # Build index + # Build index from all roots build_index( - docs_root, + self.roots, self.index, - self.asciidoc_parser, - self.markdown_parser, respect_gitignore=respect_gitignore, include_hidden=include_hidden, ) @@ -353,8 +369,23 @@ def _format_as_text(data: dict, indent: int = 0) -> str: @click.option( "--docs-root", type=click.Path(exists=True, file_okay=False, dir_okay=True, path_type=Path), - default=Path.cwd(), - help="Documentation root directory (default: current directory)", + default=None, + help="Documentation root directory (default: current directory). " + "Cannot be combined with --workspace/--reference.", +) +@click.option( + "--workspace", + multiple=True, + metavar="name=X,path=Y[,type=Z]", + help="Read-write documentation root (repeatable). " + "Required keys: name, path. Optional: type.", +) +@click.option( + "--reference", + multiple=True, + metavar="name=X,path=Y[,type=Z]", + help="Read-only documentation root (repeatable). " + "Required keys: name, path. Optional: type.", ) @click.option( "--format", @@ -392,7 +423,9 @@ def _format_as_text(data: dict, indent: int = 0) -> str: @click.pass_context def cli( ctx, - docs_root: Path, + docs_root: Path | None, + workspace: tuple[str, ...], + reference: tuple[str, ...], output_format: str, pretty: bool, verbose: bool, @@ -404,8 +437,17 @@ def cli( Access documentation structure, content, and metadata from the command line. Designed for LLM integration via bash/shell commands. """ + try: + roots = resolve_roots( + workspaces=list(workspace) if workspace else None, + references=list(reference) if reference else None, + docs_root=docs_root, + ) + except RootConfigError as e: + raise click.UsageError(str(e)) from e + ctx.obj = CliContext( - docs_root, + roots, output_format, pretty, verbose, @@ -414,6 +456,53 @@ def cli( ) +@cli.command( + epilog=""" +Examples: + dacli namespaces # List all documentation sources + dacli --format json ns # JSON output using alias +""" +) +@pass_context +def namespaces(ctx: CliContext): + """List available documentation namespaces (ADR-014). + + Shows all documentation roots with their access mode (workspace/reference), + framework type, and the documents they contain with roles and formats. + """ + ns_list = [] + for root in ctx.roots: + root_docs = [] + for doc in ctx.index._documents: + try: + doc.file_path.resolve().relative_to(root.path) + except ValueError: + continue + ext = doc.file_path.suffix.lower() + doc_format = "asciidoc" if ext in (".adoc", ".asciidoc") else "markdown" + section_count = len(doc.sections) + for s in doc.sections: + section_count += count_descendants(s) + root_docs.append({ + "slug": doc.file_path.stem.lower(), + "role": detect_document_role(doc.file_path), + "format": doc_format, + "sections": section_count, + }) + ns_list.append({ + "name": root.name, + "type": root.doc_type, + "mode": root.mode, + "documents": root_docs, + }) + + result = { + "namespaces": ns_list, + "total_namespaces": len(ns_list), + } + click.echo(format_output(ctx, result)) + + @cli.command( epilog=""" Examples: @@ -452,7 +541,10 @@ def section(ctx: CliContext, path: str): normalized_path = path.lstrip("/") # Check for path format issues (Issue #198) - corrected_path, had_extra_colons = ctx.index.normalize_path(normalized_path) + multi_root = len(ctx.roots) > 1 + corrected_path, had_extra_colons = ctx.index.normalize_path( + normalized_path, multi_root=multi_root, + ) section_obj = ctx.index.get_section(normalized_path) if section_obj is None: @@ -728,7 +820,7 @@ def metadata(ctx: CliContext, path: str | None): @pass_context def validate(ctx: CliContext): """Validate the document structure.""" - result = service_validate_structure(ctx.index, ctx.docs_root) + result = service_validate_structure(ctx.index, [r.path for r in ctx.roots]) click.echo(format_output(ctx, result)) if not result["valid"]: @@ -755,6 +847,19 @@ def update( if not processed_content.strip(): click.echo("Warning: Section content will be cleared.", err=True) + # ADR-014: Check access mode before write + section_obj = ctx.index.get_section(path) + if section_obj is not None: + root = find_root_for_file(ctx.roots, section_obj.source_location.file) + if root is not None and root.mode == "reference": + result = { + "success": False, + "error": f"Cannot modify '{path}': source is mounted as " + f"read-only reference (namespace '{root.name}').", + } + click.echo(format_output(ctx, result)) + sys.exit(EXIT_WRITE_ERROR) + result = service_update_section( index=ctx.index, file_handler=ctx.file_handler, @@ -794,6 +899,17 @@ def insert(ctx: CliContext, path: str, position: str, content: str): click.echo(format_output(ctx, result)) sys.exit(EXIT_PATH_NOT_FOUND) + # ADR-014: Check access mode before write + root = find_root_for_file(ctx.roots, section_obj.source_location.file) + if root is not None and root.mode == "reference": + result = { + "success": False, + "error": f"Cannot modify '{normalized_path}': source is mounted as " + f"read-only reference (namespace '{root.name}').", + } + click.echo(format_output(ctx, result)) + sys.exit(EXIT_WRITE_ERROR) + file_path = section_obj.source_location.file start_line = section_obj.source_location.line # Note: end_line is computed dynamically by _get_section_append_line for 'after'/'append' diff --git a/src/dacli/index_builder.py b/src/dacli/index_builder.py index ae0759c..becf114 100644 --- a/src/dacli/index_builder.py +++ b/src/dacli/index_builder.py @@ -1,8 +1,10 @@ """Index builder for dacli. -Builds the in-memory StructureIndex from documents in a docs root directory. +Builds the in-memory StructureIndex from documents in documentation roots. This module has no heavy external dependencies (no fastmcp, pydantic, etc.), enabling the CLI to be packaged as a lightweight cross-platform zipapp. + +Supports both single-root mode (backward compat) and multi-root mode (ADR-014). """ import logging @@ -11,30 +13,119 @@ from dacli.asciidoc_parser import AsciidocStructureParser, CircularIncludeError from dacli.file_utils import find_doc_files from dacli.markdown_parser import MarkdownStructureParser -from dacli.models import Document -from dacli.structure_index import StructureIndex +from dacli.models import Document, DocumentRoot +from dacli.structure_index import Section, StructureIndex logger = logging.getLogger(__name__) +def count_descendants(section: Section) -> int: + """Count total descendants of a section recursively.""" + count = len(section.children) + for child in section.children: + count += count_descendants(child) + return count + + def build_index( - docs_root: Path, + roots_or_path: list[DocumentRoot] | Path, index: StructureIndex, + asciidoc_parser: AsciidocStructureParser | None = None, + markdown_parser: MarkdownStructureParser | None = None, + *, + respect_gitignore: bool = True, + include_hidden: bool = False, +) -> None: + """Build the structure index from documents across all roots. + + Supports two calling conventions: + 1. Multi-root mode (ADR-014): build_index(roots, index, ...) + - roots: List of DocumentRoot objects + - Parsers are created internally with namespace prefixes + + 2. Single-root mode (backward compat): build_index(path, index, parser, parser, ...) + - path: Single Path to docs root + - Parsers provided by caller + + Args: + roots_or_path: List of DocumentRoot objects, or a single Path + index: StructureIndex to populate + asciidoc_parser: Parser for AsciiDoc (only used in single-root mode) + markdown_parser: Parser for Markdown (only used in single-root mode) + respect_gitignore: If True, exclude files matching .gitignore patterns + include_hidden: If True, include files in hidden directories + """ + # Handle both calling conventions + if isinstance(roots_or_path, Path): + # Single-root backward compat mode + roots = [DocumentRoot( + name=roots_or_path.name, + path=roots_or_path.resolve(), + mode="workspace", + )] + # Use provided parsers or create defaults + if asciidoc_parser is None: + asciidoc_parser = AsciidocStructureParser(base_path=roots_or_path) + if markdown_parser is None: + markdown_parser = MarkdownStructureParser(base_path=roots_or_path) + parsers_provided = True + else: + roots = roots_or_path + parsers_provided = False + + multi_root = len(roots) > 1 + documents: list[Document] = [] + all_circular_include_errors: list[dict] = [] + + for root in roots: + # In multi-root mode, create namespaced parsers for each root + if not parsers_provided: + namespace = root.name if multi_root else None + asciidoc_parser = AsciidocStructureParser( + base_path=root.path, namespace=namespace, + ) + markdown_parser = MarkdownStructureParser( + base_path=root.path, namespace=namespace, + ) + + root_documents, circular_errors = _build_index_for_root( + root.path, + asciidoc_parser, + markdown_parser, + respect_gitignore=respect_gitignore, + include_hidden=include_hidden, + ) + documents.extend(root_documents) + all_circular_include_errors.extend(circular_errors) + + # Build unified index + warnings = index.build_from_documents(documents) + for warning in warnings: + logger.warning("Index: %s", warning) + + # Issue #251: Store circular include errors on the index for validation + index._circular_include_errors = all_circular_include_errors + + +def _build_index_for_root( + docs_root: Path, asciidoc_parser: AsciidocStructureParser, markdown_parser: MarkdownStructureParser, *, respect_gitignore: bool = True, include_hidden: bool = False, -) -> None: - """Build the structure index from documents in docs_root. +) -> tuple[list[Document], list[dict]]: + """Build documents for a single documentation root. Args: docs_root: Root directory containing documentation - index: StructureIndex to populate - asciidoc_parser: Parser for AsciiDoc files - markdown_parser: Parser for Markdown files + asciidoc_parser: Parser for AsciiDoc files (may have namespace set) + markdown_parser: Parser for Markdown files (may have namespace set) respect_gitignore: If True, exclude files matching .gitignore patterns include_hidden: If True, include files in hidden directories + + Returns: + Tuple of (documents, circular_include_errors) """ documents: list[Document] = [] @@ -46,7 +137,6 @@ def build_index( ) # Scan for include directives to identify included files (Issue #184) - # Included files should not be parsed as separate root documents included_files: set[Path] = set() for adoc_file in all_adoc_files: included_files.update(AsciidocStructureParser.scan_includes(adoc_file)) @@ -55,8 +145,6 @@ def build_index( root_adoc_files = [f for f in all_adoc_files if f not in included_files] # Issue #251: Detect circular includes in the include graph - # Files that include each other circularly all end up in included_files - # with none of them becoming root documents. Detect these cycles. circular_include_errors: list[dict] = [] if all_adoc_files: include_graph: dict[Path, set[Path]] = {} @@ -89,7 +177,7 @@ def _find_cycles(node: Path, path_list: list[Path]) -> None: _find_cycles(adoc_file.resolve(), []) for circ_file in circular_files: - message = f"Circular include detected: {circ_file.name} " f"is part of an include cycle" + message = f"Circular include detected: {circ_file.name} is part of an include cycle" circular_include_errors.append( { "file": circ_file, @@ -110,7 +198,6 @@ def _find_cycles(node: Path, path_list: list[Path]) -> None: doc = asciidoc_parser.parse_file(adoc_file) documents.append(doc) except CircularIncludeError as e: - # Issue #251: Catch circular includes during parsing too logger.warning("Circular include in %s: %s", adoc_file, e) circular_include_errors.append( { @@ -120,7 +207,6 @@ def _find_cycles(node: Path, path_list: list[Path]) -> None: } ) except Exception as e: - # Log but continue with other files logger.warning("Failed to parse %s: %s", adoc_file, e) # Find and parse Markdown files @@ -129,7 +215,6 @@ def _find_cycles(node: Path, path_list: list[Path]) -> None: ): try: md_doc = markdown_parser.parse_file(md_file) - # Convert MarkdownDocument to Document doc = Document( file_path=md_doc.file_path, title=md_doc.title, @@ -140,10 +225,24 @@ def _find_cycles(node: Path, path_list: list[Path]) -> None: except Exception as e: logger.warning("Failed to parse %s: %s", md_file, e) - # Build index - warnings = index.build_from_documents(documents) - for warning in warnings: - logger.warning("Index: %s", warning) + return documents, circular_include_errors - # Issue #251: Store circular include errors on the index for validation - index._circular_include_errors = circular_include_errors + +def find_root_for_file(roots: list[DocumentRoot], file_path: Path) -> DocumentRoot | None: + """Find which DocumentRoot a file belongs to. + + Args: + roots: List of documentation roots + file_path: Absolute path to a file + + Returns: + The DocumentRoot containing the file, or None + """ + resolved = file_path.resolve() + for root in roots: + try: + resolved.relative_to(root.path) + return root + except ValueError: + continue + return None diff --git a/src/dacli/main.py b/src/dacli/main.py index 20ba657..c4dba05 100644 --- a/src/dacli/main.py +++ b/src/dacli/main.py @@ -4,8 +4,13 @@ The server can be configured via command line arguments or environment variables. Usage: + # Single-root (backward compatible): uv run dacli-mcp --docs-root /path/to/docs + # Multi-root (ADR-014): + uv run dacli-mcp --workspace name=my-project,path=/path/to/docs \ + --reference name=base-api,path=/path/to/api-docs + Or with environment variable: PROJECT_PATH=/path/to/docs uv run dacli-mcp @@ -29,6 +34,7 @@ from dacli import __version__ from dacli.mcp_app import create_mcp_server +from dacli.root_config import RootConfigError, resolve_roots def create_parser() -> argparse.ArgumentParser: @@ -46,8 +52,25 @@ def create_parser() -> argparse.ArgumentParser: "--docs-root", type=str, default=None, - help="Root directory containing documentation files. " - "Can also be set via PROJECT_PATH environment variable.", + help="Root directory containing documentation files (single-root mode). " + "Can also be set via PROJECT_PATH environment variable. " + "Cannot be combined with --workspace/--reference.", + ) + parser.add_argument( + "--workspace", + action="append", + default=None, + metavar="name=X,path=Y[,type=Z]", + help="Read-write documentation root (repeatable). " + "Required keys: name, path. Optional: type.", + ) + parser.add_argument( + "--reference", + action="append", + default=None, + metavar="name=X,path=Y[,type=Z]", + help="Read-only documentation root (repeatable). " + "Required keys: name, path. Optional: type.", ) parser.add_argument( "--no-gitignore", @@ -64,19 +87,19 @@ def create_parser() -> argparse.ArgumentParser: return parser -def get_docs_root(args_docs_root: str | None) -> Path: - """Determine the documentation root directory. +def get_docs_root(args_docs_root: str | None) -> Path | None: + """Determine the documentation root directory from legacy options. Priority: 1. Command line argument (--docs-root) 2. PROJECT_PATH environment variable - 3. Current working directory + 3. None (caller decides default) Args: args_docs_root: Value from command line argument (may be None) Returns: - Resolved path to documentation root + Resolved path to documentation root, or None if not specified """ if args_docs_root is not None: return Path(args_docs_root).resolve() @@ -85,7 +108,7 @@ def get_docs_root(args_docs_root: str | None) -> Path: if env_path: return Path(env_path).resolve() - return Path.cwd() + return None def main() -> int: @@ -98,18 +121,19 @@ def main() -> int: docs_root = get_docs_root(args.docs_root) - # Validate docs root exists - if not docs_root.exists(): - print(f"Error: Documentation root does not exist: {docs_root}", file=sys.stderr) - return 1 - - if not docs_root.is_dir(): - print(f"Error: Documentation root is not a directory: {docs_root}", file=sys.stderr) + try: + roots = resolve_roots( + workspaces=args.workspace, + references=args.reference, + docs_root=docs_root, + ) + except RootConfigError as e: + print(f"Error: {e}", file=sys.stderr) return 1 # Create and run MCP server mcp = create_mcp_server( - docs_root=docs_root, + roots=roots, respect_gitignore=not args.no_gitignore, include_hidden=args.include_hidden, ) diff --git a/src/dacli/markdown_parser.py b/src/dacli/markdown_parser.py index dfee6b7..be20a41 100644 --- a/src/dacli/markdown_parser.py +++ b/src/dacli/markdown_parser.py @@ -104,14 +104,16 @@ class MarkdownStructureParser: If not provided, file paths are relative to the file's parent. """ - def __init__(self, base_path: Path | None = None): + def __init__(self, base_path: Path | None = None, namespace: str | None = None): """Initialize the parser. Args: base_path: Optional base path for resolving relative file paths. If not provided, file prefixes will be just the filename stem. + namespace: Optional namespace prefix for multi-root mode (ADR-014) """ self.base_path = base_path + self.namespace = namespace def _get_file_prefix(self, file_path: Path) -> str: """Calculate file prefix for path generation (Issue #130, ADR-008). @@ -119,6 +121,9 @@ def _get_file_prefix(self, file_path: Path) -> str: The file prefix is the relative path from base_path to file_path, without the file extension. This ensures unique paths across documents. + In multi-root mode (ADR-014), the namespace is prepended with a colon + separator, producing paths like 'namespace:file/path:section'. + Issue #266: Only strips known extensions (.md, .adoc) to preserve dots in filenames (e.g. version numbers like "report_v1.2.3.md"). @@ -126,7 +131,7 @@ def _get_file_prefix(self, file_path: Path) -> str: file_path: Path to the document being parsed Returns: - Relative path without extension (e.g., "guides/installation") + Relative path without extension, optionally namespace-prefixed """ if self.base_path is not None: try: @@ -135,7 +140,10 @@ def _get_file_prefix(self, file_path: Path) -> str: relative = Path(file_path.name) else: relative = Path(file_path.name) - return strip_doc_extension(relative) + prefix = strip_doc_extension(relative) + if self.namespace is not None: + return f"{self.namespace}:{prefix}" + return prefix def parse_file(self, file_path: Path) -> MarkdownDocument: """Parse a single Markdown file. diff --git a/src/dacli/mcp_app.py b/src/dacli/mcp_app.py index 1442142..ceca0e7 100644 --- a/src/dacli/mcp_app.py +++ b/src/dacli/mcp_app.py @@ -22,8 +22,9 @@ from dacli import __version__ from dacli.asciidoc_parser import AsciidocStructureParser from dacli.file_handler import FileReadError, FileSystemHandler, FileWriteError -from dacli.index_builder import build_index as _build_index +from dacli.index_builder import build_index as _build_index, count_descendants, find_root_for_file from dacli.markdown_parser import MarkdownStructureParser +from dacli.models import Document, DocumentRoot, detect_document_role from dacli.services import ( compute_hash, get_project_metadata, @@ -100,28 +101,41 @@ def _get_section_append_line( def create_mcp_server( - docs_root: Path | str | None = None, + roots: list[DocumentRoot] | Path | str | None = None, *, + docs_root: Path | str | None = None, respect_gitignore: bool = True, include_hidden: bool = False, ) -> FastMCP: """Create and configure the MCP server. Args: - docs_root: Root directory containing documentation files. - If None, uses current directory. + roots: List of DocumentRoot objects (ADR-014 multi-root mode). + For backward compat, also accepts a single Path or str + (treated as single workspace root). + docs_root: Deprecated single-root path. Converted to single workspace root. respect_gitignore: If True, exclude files matching .gitignore patterns. include_hidden: If True, include files in hidden directories. Returns: Configured FastMCP instance with all tools registered. """ - # Resolve docs root - if docs_root is None: - docs_root = Path.cwd() - elif isinstance(docs_root, str): - docs_root = Path(docs_root) - docs_root = docs_root.resolve() + # Handle backward compat: Path/str → single workspace root + if isinstance(roots, (Path, str)): + docs_root = roots + roots = None + + if roots is None: + if docs_root is None: + docs_root = Path.cwd() + elif isinstance(docs_root, str): + docs_root = Path(docs_root) + docs_root = docs_root.resolve() + roots = [DocumentRoot( + name=docs_root.name, + path=docs_root, + mode="workspace", + )] # Create server instance mcp = FastMCP( @@ -132,35 +146,79 @@ def create_mcp_server( # Initialize components index = StructureIndex() file_handler = FileSystemHandler() - asciidoc_parser = AsciidocStructureParser(base_path=docs_root) - markdown_parser = MarkdownStructureParser(base_path=docs_root) # Build initial index _build_index( - docs_root, + roots, index, - asciidoc_parser, - markdown_parser, respect_gitignore=respect_gitignore, include_hidden=include_hidden, ) def rebuild_index() -> None: - """Rebuild the index after file modifications. - - This ensures the index reflects the current state of the file system - after write operations like update_section or insert_content. - """ + """Rebuild the index after file modifications.""" _build_index( - docs_root, + roots, index, - asciidoc_parser, - markdown_parser, respect_gitignore=respect_gitignore, include_hidden=include_hidden, ) # Register tools + @mcp.tool() + def get_namespaces() -> dict: + """Get available documentation namespaces. + + Use this tool first to understand what documentation sources are + available, their access modes, and what documents each contains. + + Returns: + 'namespaces': List of namespace objects with 'name', 'type', + 'mode' (workspace/reference), and 'documents' (list with + slug, role, format, sections count). + 'total_namespaces': Number of namespaces. + """ + namespaces = [] + for root in roots: + # Collect documents belonging to this root + root_docs = [] + for doc in index._documents: + try: + doc.file_path.resolve().relative_to(root.path) + except ValueError: + continue + + # Determine format from file extension + ext = doc.file_path.suffix.lower() + doc_format = "asciidoc" if ext in (".adoc", ".asciidoc") else "markdown" + + # Count sections in this document + section_count = len(doc.sections) + for s in doc.sections: + section_count += count_descendants(s) + + # Derive slug from filename + slug = doc.file_path.stem.lower() + + root_docs.append({ + "slug": slug, + "role": detect_document_role(doc.file_path), + "format": doc_format, + "sections": section_count, + }) + + namespaces.append({ + "name": root.name, + "type": root.doc_type, + "mode": root.mode, + "documents": root_docs, + }) + + return { + "namespaces": namespaces, + "total_namespaces": len(namespaces), + } + @mcp.tool() def get_structure(max_depth: int | None = None) -> dict: """Get the hierarchical document structure. @@ -437,6 +495,18 @@ def update_section( Success status with 'success', 'path', 'location', 'previous_hash', and 'new_hash' for optimistic locking support. """ + # ADR-014: Check access mode before write + section_obj = index.get_section(path) + if section_obj is not None: + root = find_root_for_file(roots, section_obj.source_location.file) + if root is not None and root.mode == "reference": + return { + "success": False, + "error": f"Cannot modify '{path}': source is mounted as " + f"read-only reference (namespace '{root.name}'). " + f"Use --workspace instead of --reference to enable writes.", + } + result = service_update_section( index=index, file_handler=file_handler, @@ -445,7 +515,6 @@ def update_section( preserve_title=preserve_title, expected_hash=expected_hash, ) - # Rebuild index to reflect file changes if update was successful if result.get("success", False): rebuild_index() return result @@ -486,6 +555,16 @@ def insert_content( if section is None: return {"success": False, "error": f"Section '{normalized_path}' not found"} + # ADR-014: Check access mode before write + root = find_root_for_file(roots, section.source_location.file) + if root is not None and root.mode == "reference": + return { + "success": False, + "error": f"Cannot modify '{normalized_path}': source is mounted as " + f"read-only reference (namespace '{root.name}'). " + f"Use --workspace instead of --reference to enable writes.", + } + file_path = section.source_location.file start_line = section.source_location.line @@ -628,6 +707,6 @@ def validate_structure() -> dict: 'warnings': List of warning objects (orphaned_file, unclosed_block, unclosed_table). 'validation_time_ms': Time taken for validation in milliseconds. """ - return service_validate_structure(index, docs_root) + return service_validate_structure(index, [r.path for r in roots]) return mcp diff --git a/src/dacli/models.py b/src/dacli/models.py index ca2289d..a587751 100644 --- a/src/dacli/models.py +++ b/src/dacli/models.py @@ -10,6 +10,7 @@ - Element: Extractable content element (code, table, image, etc.) - CrossReference: Internal and external references - Document: Base class for parsed documents +- DocumentRoot: A documentation root with namespace and access mode (ADR-014) """ from dataclasses import asdict, dataclass, field @@ -152,6 +153,49 @@ class Document: parse_warnings: list[ParseWarning] = field(default_factory=list) +@dataclass +class DocumentRoot: + """A documentation root with namespace and access mode (ADR-014). + + Each root represents an independent documentation source that is + indexed and searchable. Workspace roots are read-write, reference + roots are read-only. + + Attributes: + name: Namespace identifier (unique across all roots) + path: Resolved filesystem path to the documentation root + mode: Access mode — 'workspace' (read-write) or 'reference' (read-only) + doc_type: Optional framework type annotation (arc42, tpo42, req42, ...) + """ + + name: str + path: Path + mode: Literal["workspace", "reference"] + doc_type: str | None = None + + +# Well-known filenames classified as project-meta (ADR-014) +PROJECT_META_STEMS = frozenset({ + "readme", "llm", "claude", "changelog", "todo", + "install", "roadmap", "agents", +}) + + +def detect_document_role(file_path: Path) -> str: + """Detect whether a document is content or project metadata. + + Uses well-known filename stems to classify documents. + Everything not recognized as project-meta is documentation. + + Args: + file_path: Path to the document file + + Returns: + 'project-meta' for known meta files, 'documentation' otherwise + """ + return "project-meta" if file_path.stem.lower() in PROJECT_META_STEMS else "documentation" + + def model_to_dict(obj: Any) -> Any: """Convert a dataclass model to a JSON-serializable dictionary. diff --git a/src/dacli/root_config.py b/src/dacli/root_config.py new file mode 100644 index 0000000..ae0bec1 --- /dev/null +++ b/src/dacli/root_config.py @@ -0,0 +1,153 @@ +"""Multi-root configuration parsing and validation (ADR-014). + +Shared between MCP and CLI entry points. Handles parsing of +--workspace/--reference key=value specs and backward-compatible +--docs-root conversion. +""" + +from pathlib import Path + +from dacli.models import DocumentRoot + +# Keys accepted in root specs +_REQUIRED_KEYS = {"name", "path"} +_OPTIONAL_KEYS = {"type"} +_ALL_KEYS = _REQUIRED_KEYS | _OPTIONAL_KEYS + + +class RootConfigError(Exception): + """Raised for invalid root configuration.""" + + +def parse_root_spec(spec: str, mode: str) -> DocumentRoot: + """Parse a key=value root specification string. + + Format: name=my-docs,path=/path/to/docs[,type=arc42] + + Args: + spec: Comma-separated key=value string + mode: 'workspace' or 'reference' + + Returns: + Parsed DocumentRoot + + Raises: + RootConfigError: On missing keys, unknown keys, or invalid values + """ + pairs: dict[str, str] = {} + for part in spec.split(","): + part = part.strip() + if "=" not in part: + raise RootConfigError( + f"Invalid key=value pair '{part}' in --{mode} spec. " + f"Expected format: name=my-docs,path=/path/to/docs" + ) + key, value = part.split("=", 1) + key = key.strip() + value = value.strip() + if key in pairs: + raise RootConfigError(f"Duplicate key '{key}' in --{mode} spec") + pairs[key] = value + + # Check for unknown keys (forward compatibility — reject early) + unknown = set(pairs.keys()) - _ALL_KEYS + if unknown: + raise RootConfigError( + f"Unknown key(s) {unknown} in --{mode} spec. " + f"Allowed keys: {sorted(_ALL_KEYS)}" + ) + + # Check required keys + missing = _REQUIRED_KEYS - set(pairs.keys()) + if missing: + raise RootConfigError( + f"Missing required key(s) {missing} in --{mode} spec. " + f"Expected format: name=my-docs,path=/path/to/docs" + ) + + path = Path(pairs["path"]).resolve() + + return DocumentRoot( + name=pairs["name"], + path=path, + mode=mode, + doc_type=pairs.get("type"), + ) + + +def resolve_roots( + workspaces: list[str] | None = None, + references: list[str] | None = None, + docs_root: Path | None = None, +) -> list[DocumentRoot]: + """Resolve root specifications into a validated list of DocumentRoots. + + Handles three modes: + - --docs-root only: backward compat, single workspace + - --workspace/--reference: multi-root mode + - Neither: defaults to cwd as single workspace + + Args: + workspaces: List of --workspace spec strings + references: List of --reference spec strings + docs_root: Legacy --docs-root path + + Returns: + Validated list of DocumentRoot objects + + Raises: + RootConfigError: On conflicts, collisions, or invalid paths + """ + workspaces = workspaces or [] + references = references or [] + has_multi_root = bool(workspaces or references) + + if docs_root is not None and has_multi_root: + raise RootConfigError( + "Cannot combine --docs-root with --workspace/--reference. " + "Use --workspace instead of --docs-root for multi-root mode." + ) + + roots: list[DocumentRoot] = [] + + if has_multi_root: + for spec in workspaces: + roots.append(parse_root_spec(spec, "workspace")) + for spec in references: + roots.append(parse_root_spec(spec, "reference")) + else: + # Backward compat: --docs-root or cwd + if docs_root is None: + docs_root = Path.cwd() + docs_root = docs_root.resolve() + roots.append(DocumentRoot( + name=docs_root.name, + path=docs_root, + mode="workspace", + )) + + # Validate paths exist + for root in roots: + if not root.path.exists(): + raise RootConfigError( + f"Documentation root does not exist: {root.path} " + f"(namespace '{root.name}')" + ) + if not root.path.is_dir(): + raise RootConfigError( + f"Documentation root is not a directory: {root.path} " + f"(namespace '{root.name}')" + ) + + # Check namespace collisions + seen_names: dict[str, Path] = {} + for root in roots: + if root.name in seen_names: + raise RootConfigError( + f"Namespace collision: '{root.name}' is used by both " + f"{seen_names[root.name]} and {root.path}. " + f"Each root must have a unique name." + ) + seen_names[root.name] = root.path + + return roots diff --git a/src/dacli/services/validation_service.py b/src/dacli/services/validation_service.py index 8e528a0..2102796 100644 --- a/src/dacli/services/validation_service.py +++ b/src/dacli/services/validation_service.py @@ -10,7 +10,25 @@ from dacli.structure_index import StructureIndex -def validate_structure(index: StructureIndex, docs_root: Path) -> dict: +def _relativize(file_path: Path, docs_roots: list[Path]) -> Path: + """Make a path relative to the first matching root. + + Args: + file_path: Absolute file path + docs_roots: List of resolved root paths + + Returns: + Relative path, or the original path if no root matches + """ + for root in docs_roots: + try: + return file_path.relative_to(root) + except ValueError: + continue + return file_path + + +def validate_structure(index: StructureIndex, docs_roots: Path | list[Path]) -> dict: """Validate the document structure. Checks for: @@ -19,7 +37,7 @@ def validate_structure(index: StructureIndex, docs_root: Path) -> dict: Args: index: The structure index to validate. - docs_root: Root directory of documentation. + docs_roots: Root directory or list of root directories (ADR-014). Returns: Dictionary with: @@ -28,20 +46,21 @@ def validate_structure(index: StructureIndex, docs_root: Path) -> dict: - warnings: List of warning objects - validation_time_ms: Time taken for validation """ + # Normalize to list for uniform handling + if isinstance(docs_roots, Path): + docs_roots = [docs_roots] + resolved_roots = [r.resolve() for r in docs_roots] + start_time = time.time() errors: list[dict] = [] warnings: list[dict] = [] # Issue #251: Report circular include errors explicitly - docs_root_resolved = docs_root.resolve() circular_files: set[Path] = set() for circ_error in index._circular_include_errors: file_path = circ_error["file"] - try: - rel_path = file_path.relative_to(docs_root_resolved) - except ValueError: - rel_path = file_path + rel_path = _relativize(file_path, resolved_roots) errors.append( { "type": "circular_include", @@ -49,7 +68,6 @@ def validate_structure(index: StructureIndex, docs_root: Path) -> dict: "message": circ_error["message"], } ) - # Track all files involved in circular includes circular_files.add(file_path.resolve()) for chain_path in circ_error["include_chain"]: circular_files.add(chain_path.resolve()) @@ -57,22 +75,20 @@ def validate_structure(index: StructureIndex, docs_root: Path) -> dict: # Get all indexed files indexed_files = set(index._file_to_sections.keys()) - # Get all doc files in docs_root (respecting gitignore) + # Get all doc files across all roots (respecting gitignore) all_doc_files: set[Path] = set() - for adoc_file in find_doc_files(docs_root, "*.adoc"): - all_doc_files.add(adoc_file.resolve()) - for md_file in find_doc_files(docs_root, "*.md"): - all_doc_files.add(md_file.resolve()) + for docs_root in resolved_roots: + for adoc_file in find_doc_files(docs_root, "*.adoc"): + all_doc_files.add(adoc_file.resolve()) + for md_file in find_doc_files(docs_root, "*.md"): + all_doc_files.add(md_file.resolve()) # Check for orphaned files (files not indexed) # Issue #251: Exclude files involved in circular includes from orphaned detection indexed_resolved = {f.resolve() for f in indexed_files} for doc_file in all_doc_files: if doc_file not in indexed_resolved and doc_file not in circular_files: - try: - rel_path = doc_file.relative_to(docs_root_resolved) - except ValueError: - rel_path = doc_file + rel_path = _relativize(doc_file, resolved_roots) warnings.append( { "type": "orphaned_file", @@ -84,10 +100,7 @@ def validate_structure(index: StructureIndex, docs_root: Path) -> dict: # Collect parse warnings from all documents (Issue #148) for doc in index._documents: for pw in doc.parse_warnings: - try: - rel_path = pw.file.relative_to(docs_root_resolved) - except ValueError: - rel_path = pw.file + rel_path = _relativize(pw.file, resolved_roots) warnings.append( { "type": pw.type.value, @@ -99,8 +112,6 @@ def validate_structure(index: StructureIndex, docs_root: Path) -> dict: # Issue #268: Include duplicate-path warnings from index build for build_warning in index._build_warnings: if "Duplicate section path" in build_warning: - # Parse the warning string to extract the path - # Format: "Duplicate section path: 'path' (first at file:line, duplicate at file:line)" import re match = re.search(r"Duplicate section path: '([^']+)'", build_warning) @@ -115,19 +126,12 @@ def validate_structure(index: StructureIndex, docs_root: Path) -> dict: # Issue #219: Check for unresolved includes for doc in index._documents: - # Only AsciiDoc documents have includes (check for attribute) if hasattr(doc, "includes"): for include in doc.includes: if not include.target_path.exists(): source_loc = include.source_location - try: - rel_source = source_loc.file.relative_to(docs_root_resolved) - except ValueError: - rel_source = source_loc.file - try: - rel_target = include.target_path.relative_to(docs_root_resolved) - except ValueError: - rel_target = include.target_path + rel_source = _relativize(source_loc.file, resolved_roots) + rel_target = _relativize(include.target_path, resolved_roots) errors.append( { "type": "unresolved_include", diff --git a/src/dacli/structure_index.py b/src/dacli/structure_index.py index b462fc0..40e21e9 100644 --- a/src/dacli/structure_index.py +++ b/src/dacli/structure_index.py @@ -286,56 +286,90 @@ def _calculate_path_similarity(self, requested: str, existing: str) -> int: return score @staticmethod - def normalize_path(path: str) -> tuple[str, bool]: + def normalize_path(path: str, *, multi_root: bool = False) -> tuple[str, bool]: """Normalize a path by converting extra colons to dots. - The correct path format is: - - Colon (:) separates document from first-level section - - Dot (.) separates nested sections - Example: doc:section.subsection.detail + Path formats (ADR-014): + - Single-root: 'file/path:section.subsection' (1 colon, extra = typo) + - Multi-root: 'namespace:file/path:section.subsection' (2 colons valid) + + In single-root mode, more than 1 colon is a typo. + In multi-root mode, 2 colons is valid; 3+ is a typo. Args: path: Path that may contain multiple colons + multi_root: Whether multi-root mode is active Returns: Tuple of (normalized_path, had_extra_colons) - - normalized_path: Path with extra colons converted to dots - - had_extra_colons: True if path had more than one colon + - normalized_path: Path with excess colons converted to dots + - had_extra_colons: True if normalization was applied """ - if path.count(":") <= 1: + colon_count = path.count(":") + max_colons = 2 if multi_root else 1 + + if colon_count <= max_colons: return path, False - # Split at first colon only - parts = path.split(":", 1) - if len(parts) == 2: - # Convert additional colons in section part to dots - file_part = parts[0] + if multi_root: + # 3+ colons in multi-root: namespace:file:section_with_extra_colons + parts = path.split(":", 2) + section_part = parts[2].replace(":", ".") + return f"{parts[0]}:{parts[1]}:{section_part}", True + else: + # 2+ colons in single-root: file:section_with_extra_colons + parts = path.split(":", 1) section_part = parts[1].replace(":", ".") - return f"{file_part}:{section_part}", True + return f"{parts[0]}:{section_part}", True - return path, False + @staticmethod + def parse_path_components(path: str) -> tuple[str | None, str, str]: + """Parse a path into namespace, file, and section components. - def _parse_path_components(self, path: str) -> tuple[str, str]: - """Parse a path into file and section components. + Handles all path formats (ADR-014): + - 'file/path:section.sub' → (None, 'file/path', 'section.sub') + - 'namespace:file/path:section.sub' → ('namespace', 'file/path', 'section.sub') + - 'namespace:file/path' → ('namespace', 'file/path', '') + - 'file/path' → (None, 'file/path', '') + - 'section.sub' → (None, '', 'section.sub') Args: - path: Path in format "file/path:section.subsection" or "file/path" - Also handles legacy format "section.subsection" (no colon, no slash) + path: Path string in any supported format Returns: - Tuple of (file_component, section_component). - For legacy paths without colon or slash, returns ("", path) to treat as section. + Tuple of (namespace, file_component, section_component). + namespace is None for single-root paths. """ - if ":" in path: - # New format: file:section + colon_count = path.count(":") + if colon_count == 2: + # Multi-root: namespace:file:section + parts = path.split(":", 2) + return parts[0], parts[1], parts[2] + elif colon_count == 1: + # Single-root: file:section parts = path.split(":", 1) - return parts[0], parts[1] + return None, parts[0], parts[1] elif "/" in path: # Root section with file path (no colon means no section part) - return path, "" + return None, path, "" else: - # Legacy format or simple section name - treat as section, not file - return "", path + # Legacy format or simple section name + return None, "", path + + def _parse_path_components(self, path: str) -> tuple[str, str]: + """Parse a path into file and section components (legacy API). + + Args: + path: Path in format "file/path:section.subsection" or "file/path" + + Returns: + Tuple of (file_component, section_component). + """ + ns, file_part, section_part = self.parse_path_components(path) + if ns is not None: + # For similarity matching, include namespace in file component + file_part = f"{ns}:{file_part}" if file_part else ns + return file_part, section_part def get_elements( self, diff --git a/src/docs/arc42/adr/ADR-014.adoc b/src/docs/arc42/adr/ADR-014.adoc new file mode 100644 index 0000000..80266e9 --- /dev/null +++ b/src/docs/arc42/adr/ADR-014.adoc @@ -0,0 +1,371 @@ +=== ADR-014: Multi-Root Documentation Sources + +Status:: Proposed (2026-03-11) + +Deciders:: Development Team + +Context:: + +`dacli` currently operates on a single `--docs-root` directory. All documents within that root are treated equally: readable, searchable, and writable. Real-world usage reveals scenarios where a user works on _one_ documentation project but needs _contextual knowledge_ from related, separate documentation sources — without re-explaining that context every session, without duplicating content, and without risking unintended modifications. + +Decision:: + +Introduce **multi-root support** with two access modes: + +workspace:: Read-write. The documentation being actively worked on. +reference:: Read-only. Referenceable documentation of related (sub-)projects. References are stable by definition — ideally versioned, tagged, or at minimum at a known git commit and not dirty. How the reference is provided (local checkout, `https://`, `file://`, InitContainer, sidecar) is an operational detail outside of dacli's concern. + +==== Motivating Scenarios + +Scenario 1 — Industrial Product Portfolio:: +A portfolio of 2 base products and 8 add-ons. Add-ons share common infrastructure and protocol specifications with the base products. When working on Add-On 3's documentation, the user needs read-only access to the base product docs, shared conventions, and protocol specs. These sources use structured ID conventions (e.g., `FR-P1-01` for Functional Requirement Product 1 No. 01, `QR-I2-12` for Quality Requirement Infrastructure 2 No. 12) that enable cross-referencing across project boundaries. Each sub-project publishes to a known base URL (e.g., `https://kb.company.tld/family-01/hf-util`). + +Scenario 2 — Yocto/OpenEmbedded Layer Stack:: +A Yocto project with 14 layers (3 OE-Core, 4 OE, 3 Community, 2 vendor, 1 BSP, 1 Application). When working on the Application Layer documentation, the user needs context from lower layers (API contracts, board support, build system conventions) as read-only reference. + +Scenario 3 — Specification and Template Co-Development:: +A new documentation template is being specified (spec) and implemented (template) simultaneously. Both are actively developed and reference each other — requiring two writable workspaces with mutual visibility. + +==== Documentation Ecosystem Context + +Real-world documentation rarely exists in isolation. Projects combine multiple documentation frameworks and source types: + +Structured frameworks:: arc42 (architecture), req42 (requirements), tpo42 (arc42+req42 integrated), ops42 (operations, in spec phase), quality42, aim42 +Generated references:: Doxygen, Javadoc, Sphinx (Python, CMake), POD (CPAN) +Design artifacts:: SysML models, circuit diagrams, Canvas formats +Combined frameworks:: tpo42 demonstrates that a single documentation root can contain multiple framework documents (one `arc42.adoc` and one `req42.adoc` with explicit semantic mappings between chapters) + +Not all reference sources conform to a template framework. Doxygen output, hardware schematics, and SysML models are valuable context but have no "template type." The architecture must accommodate this diversity. + +==== Current Limitations + +The single-root architecture forces users to either: + +* Re-explain shared context to the LLM every session (wasteful, error-prone, violates DRY) +* Merge all docs into one root (risks unintended modifications, violates SPOT) +* Run multiple dacli-mcp instances (loses cross-root search, complex setup, no write protection) + +Additionally, dacli currently parses all `*.md` files including files like `LLM.md` or `CLAUDE.md` without distinguishing their purpose from regular documentation. The document role classification introduced in this ADR addresses this by annotating each parsed document with its role (`documentation` or `project-meta`). + +==== Relationship to Existing ADRs and Issues + +* ADR-001 (File system as truth): Each root remains an independent file system source of truth +* ADR-002 (In-memory index): Index must span multiple roots with namespace separation +* #185 / ADR-007 (SQLite Index): Persistent index could cache multi-root structures efficiently +* #265 (RAG/sqlite-vec): Vector search across multiple roots would multiply the value of RAG + +==== CLI Parameter Format + +Sources are specified using explicit key=value parameters. This avoids delimiter-based path heuristics that would break across platforms (Windows drive letters, IBM System i/z volumes, UNC paths). As a bonus, the `path` key naturally extends to URIs — enabling future support for remote sources (`smb://`, `https://`, `dav://`) with local paths as implicit `file:`. + +[source,bash] +---- +# Full specification with all attributes +--workspace name=addon-3,type=arc42,path=/projects/customer-a/addon-3/docs +--reference name=base-prd1,type=arc42,path=/projects/customer-a/base-product/docs +--reference name=common-prot,type=tpo42,path=/projects/customer-a/serial-protocol/docs +--reference name=infra-foo,type=req42,path=/projects/customer-a/infra-foo/docs + +# Without type (Doxygen output, schematics, SysML, ...) +--reference name=hw-schematics,path=/projects/customer-a/hw-docs +--reference name=libfoo-api,path=/projects/customer-a/libfoo/html + +# Cross-platform — no path heuristics needed +--reference name=legacy-docs,path=C:\Projects\legacy\docs +--reference name=mainframe,path=/QSYS.LIB/MYLIB.LIB/DOCS.FILE + +# URIs for remote or mounted sources (future) +--reference name=team-wiki,path=smb://fileserver/docs/wiki +--reference name=published,path=https://kb.company.tld/family-01/base-product + +# Backward compatible: --docs-root becomes workspace, name derived from directory +dacli-mcp --docs-root /path/to/docs +---- + +Required keys:: +name::: Clarifies the namespace +path::: Clarifies the path to this _document root_ + +Optional keys:: +type::: (template framework), +spec::: (framework specification source — see below). +Unknown keys::: rejected (forward compatibility for future attributes like `base_url`). + +The `spec` key::: tells the LLM where to learn about an unfamiliar framework. Three forms: + +Omitted:::: LLM relies on its own knowledge (sufficient for well-known frameworks like arc42) +Path:::: `spec=/path/to/req42-guide` — dacli serves the spec as a reference document, the LLM reads it on demand +MCP URI:::: `spec=mcp://req42-server` — a dedicated MCP server provides framework guidance on demand, keeping the LLM's context focused on what is currently relevant + +[source,bash] +---- +# arc42: LLM knows it, no spec needed +--workspace name=addon-3,type=arc42,path=/projects/addon-3/docs + +# req42: less known, point to the framework docs +--reference name=infra-foo,type=req42,spec=/path/to/req42-templates,path=/projects/infra-foo/docs + +# ops42: in development, dedicated MCP server for active guidance +--workspace name=my-service,type=ops42,spec=mcp://ops42-guide,path=/projects/my-service/docs +---- + +==== Namespace Separation + +Each root's `name` becomes its namespace. Section paths are prefixed with the namespace, using the existing path format convention (colon separates namespace from document/section path): + +.Example: Scenario 1 configuration +[source,bash] +---- +--workspace name=addon-3,type=arc42,path=/projects/customer-a/addon-3/docs +--reference name=base-prd1,type=arc42,path=/projects/customer-a/base-product/docs +--reference name=common-prot,type=tpo42,path=/projects/customer-a/serial-protocol/docs +--reference name=hw-schematics,path=/projects/customer-a/hw-docs +---- + +.Resulting section paths +---- +addon-3:api.endpoints <-- workspace (read-write) +base-prd1:api.core-protocol <-- reference (read-only) +common-prot:glossar <-- reference (read-only) +hw-schematics:connector-pinout <-- reference (read-only, no template type) +---- + +For tpo42-style roots containing multiple framework documents, the namespace applies to the root. The individual documents (arc42, req42) appear as the first segment of the dot-separated path within that namespace. This preserves the existing convention of using the colon only once: + +---- +my-product:arc42.introduction-and-goals <-- tpo42 root, arc42 document +my-product:req42.business-goals <-- tpo42 root, req42 document +---- + +**Namespace collisions:** If two roots specify the same `name`, dacli rejects the configuration at startup with a clear error message. Names must be unique across all workspace and reference declarations. + +==== New Tool: `get_namespaces` + +Multi-root introduces a new tool as the entry point for LLM orientation: + +.Parameters +None + +.Returns +[source,json] +---- +{ + "namespaces": [ + { + "name": "addon-3", + "type": "arc42", + "mode": "workspace", + "documents": [ + {"slug": "arc42", "role": "documentation", "format": "asciidoc", "sections": 28}, + {"slug": "readme", "role": "project-meta", "format": "markdown", "sections": 3}, + {"slug": "claude", "role": "project-meta", "format": "markdown", "sections": 5} + ] + }, + { + "name": "base-prd1", + "type": "arc42", + "mode": "reference", + "documents": [ + {"slug": "arc42", "role": "documentation", "format": "asciidoc", "sections": 42}, + {"slug": "api", "role": "documentation", "format": "openapi", "sections": 15}, + {"slug": "install", "role": "project-meta", "format": "markdown", "sections": 3} + ] + }, + { + "name": "common-prot", + "type": "tpo42", + "mode": "reference", + "documents": [ + {"slug": "arc42", "role": "documentation", "format": "asciidoc", "sections": 20}, + {"slug": "req42", "role": "documentation", "format": "asciidoc", "sections": 14} + ] + }, + { + "name": "hw-schematics", + "type": null, + "mode": "reference", + "documents": [ + {"slug": "pinouts", "role": "documentation", "format": "asciidoc", "sections": 12} + ] + } + ], + "total_namespaces": 4 +} +---- + +Each document within a namespace carries a `role`: + +[cols="2,4"] +|=== +| Role | Description + +| `documentation` | Inhaltliche Dokumentation — the core business of dacli (Default). Covers structured frameworks (arc42, req42, OpenAPI/Swagger, Canvas, ...) as well as generated references (Doxygen, Sphinx, POD, Javadoc). +| `project-meta` | Project-specific meta files and helpers (README.md, LLM.md, CLAUDE.md, TODO.md, INSTALL.md, ROADMAP.adoc, CHANGELOG.md, ...). +|=== + +The `type` on the root level identifies _which_ framework the documentation follows (e.g., `arc42`, `tpo42`, `openapi`). The `role` distinguishes the core documentation content from project-level meta files. Both are parsed and searchable — but the role helps the reader (human or LLM) understand the document's purpose. + +This tool answers: "What documentation sources are available, what kind are they, what roles do their documents serve, and can I write to them?" The LLM calls this first, then uses `get_structure` with a namespace scope to drill into specific roots. + +NOTE: In single-root mode (`--docs-root`), `get_namespaces` returns one entry with `mode: "workspace"` and a name derived from the directory. Existing tools continue to work without namespace prefixes for backward compatibility. + +==== Tool Behavior by Access Mode + +[cols="2,1,1"] +|=== +| Tool | workspace | reference + +| `get_namespaces` | Full | Full +| `get_structure` | Full | Full +| `get_section` | Full | Full +| `get_sections_at_level` | Full | Full +| `search` | Full | Full +| `get_elements` | Full | Full +| `get_metadata` | Full | Full +| `get_dependencies` | Full | Full +| `validate_structure` | Full | Full +| `update_section` | Allowed | *Rejected* +| `insert_content` | Allowed | *Rejected* +|=== + +Write operations on reference roots return a clear error: + +[source,json] +---- +{ + "success": false, + "error": "Cannot modify 'base-prd1:api.core-protocol': source is mounted as read-only reference. Use --workspace instead of --reference to enable writes." +} +---- + +==== Cross-Root Search and Navigation + +All read tools operate across all roots by default. Results are annotated with namespace and access mode: + +[source,json] +---- +{ + "query": "QR-I2-12", + "results": [ + {"path": "infra-foo:quality-requirements.qr-i2-12", "source": "reference", "score": 0.95}, + {"path": "addon-3:requirements.references", "source": "workspace", "score": 0.42} + ], + "total_results": 2 +} +---- + +The existing `scope` parameter can filter by namespace: `search(query="auth", scope="base-prd1")`. + +==== Extended Metadata + +With multi-root, `get_namespaces` provides structural orientation (what roots exist, their documents and roles). `get_metadata()` complements this with quantitative data that `get_namespaces` does not cover: + +Without path:: Aggregated statistics — total word count, last modified timestamp, formats in use +With namespace-prefixed path:: Section-level statistics — word count, last modified, subsection count + +The existing `get_metadata` response structure remains unchanged. Section paths simply gain namespace prefixes in multi-root mode. + +==== What dacli Does NOT Do + +Interpret template/framework semantics:: The `type` on a root (arc42, openapi, canvas, ...) is an opaque annotation. dacli does not know the chapter structure of arc42 or the path/schema layout of OpenAPI. Understanding what a framework _means_ is the job of a dedicated template MCP server or the LLM's own knowledge. Initial parser support covers AsciiDoc and Markdown; additional format parsers (OpenAPI YAML, Doxygen XML, RST, ...) are additive and do not change the multi-root architecture. +Resolve ID conventions:: Structured IDs like `QR-I2-12` are document content. `search()` finds them. The naming conventions and their meaning are documented in each project's LLM.md and interpreted by the LLM. +Act on project-meta content:: dacli classifies files like LLM.md, README.md, CLAUDE.md as `role: "project-meta"` — they are parsed and searchable, but dacli does not act on their content. Paths belong in CLI/MCP configuration, not in project-meta files. Project-meta files may reference namespaces by name. +Know template-level cross-references:: That req42:constraints maps to arc42:architecture-constraints is template knowledge, not dacli knowledge. + +===== Consequences + +Positive:: + +Eliminates context re-telling::: Shared knowledge is always available, indexed and searchable across sessions (DRY) +Prevents accidental modifications::: Reference sources are explicitly read-only (SPOT — content lives in one place) +Scales to complex projects::: Product portfolios, layer stacks, co-development, and mixed source types are first-class citizens +Template-agnostic::: Works equally well with arc42, Doxygen, SysML, schematics, or any other documentation format that dacli can parse +Backward compatible::: `--docs-root` continues to work as a single workspace +Multiplies value of existing tools::: Search, elements, metadata — all work across roots without additional tool APIs +Clean separation of concerns::: dacli transports and annotates, template MCP servers interpret +Enables future features::: Cross-root dependency analysis, portfolio-level dashboards, cross-root RAG (#265) +Cross-root documentation quality validation::: With namespace awareness, `validate_structure` can detect unreferenced dependencies — e.g., a reference source `base-prd1` is mounted but never mentioned in the workspace's documentation. This provides the raw signal; the _interpretation_ (should `base-prd1` appear in arc42 chapter 3 "Context & Scope" or in req42 chapter 3 "Scope"?) remains the job of the LLM or a template MCP server. Many reference sources should naturally surface in framework chapters like Scope, Building Blocks, Deployment View (arc42) or Scope, Supporting Models, Constraints (req42). + +Negative:: + +Index complexity::: Namespace-aware index with per-root access control adds code complexity to `StructureIndex` +Path verbosity::: Namespace prefixes make paths longer (`base-prd1:api.core-protocol` vs. `api.core-protocol`) +Memory footprint::: Multiple large documentation roots increase in-memory index size (mitigated by ADR-007/SQLite persistence) +Configuration learning curve::: Users must understand the key=value format and workspace vs. reference distinction +Testing surface::: Combinatorial scenarios (multiple workspaces, mixed modes, with/without types, namespace collisions) increase the test matrix significantly + +Neutral:: + +CLI tool (`dacli` non-MCP)::: would also benefit from multi-root but may have different UX requirements — to be evaluated separately +No impact::: on file system layout — each root is independent, no cross-root symlinks or includes required +The LLM.md/CLAUDE.md classification::: issue is addressed by document roles in this ADR — no separate bug fix needed + +==== Pugh Matrix: Multi-Root Architecture + +[cols="3,1,1,1"] +|=== +| Criterion | Multi-Root in dacli (Baseline) | Multiple dacli Instances | Merged Single Root + +| Cross-Root Search | 0 | - | + +| Write Protection | 0 | 0 | - +| Configuration Simplicity | 0 | - | + +| Namespace Clarity | 0 | - | - +| Implementation Effort | 0 | + | + +| Scalability (10+ roots) | 0 | - | - +| Backward Compatibility | 0 | + | 0 +| LLM Context Efficiency | 0 | - | 0 +| Template-Agnostic Sources | 0 | 0 | 0 +| **Total** | **0** | **-3** | **-1** +|=== + +_Legend: + better than baseline, 0 same as baseline, - worse than baseline_ + +Multiple dacli instances rejected:: Loses cross-root search. Requires the LLM to juggle multiple MCP server tool namespaces. Read-only enforcement possible via `--read-only` flag per instance, but fragmented UX and no unified metadata. Does not scale well beyond 3-4 roots. + +Merged single root rejected:: Conflates workspace and reference content. No write protection — risk of modifying shared or upstream documentation. Search results lack provenance. Violates SPOT when content must be duplicated to appear in the merged root. + +Multi-root in dacli selected:: Best balance of cross-root visibility, write protection, and unified search. Higher implementation effort justified by real-world scenarios. Template-agnostic design accommodates the full spectrum from structured frameworks (arc42, req42) to generated references (Doxygen, Sphinx) and design artifacts (SysML, schematics). + +==== Implementation Phases + +. Phase — Core Multi-Root (MVP) + +.. Add `--workspace` and `--reference` CLI parameters with key=value parsing (`name`, `path`, optional `type`) — both `dacli` CLI and `dacli-mcp` +.. Extend `StructureIndex` with namespace-aware storage and per-root access mode +.. Add access mode check to `update_section` and `insert_content` +.. Backward compatibility: `--docs-root` maps to `--workspace` with namespace derived from directory name +.. Namespace collision detection with clear error messages +.. Role detection via well-known filenames (README.md, LLM.md, CLAUDE.md, CHANGELOG.md, TODO.md, INSTALL.md → `project-meta`, everything else → `documentation`) + +. Phase — Enhanced Configuration + +.. `.dacli.json` per documentation root for root-specific metadata (analogous to Yocto `layer.conf`) — role overrides, `base_url`, namespace aliases +.. `spec` key support — path-based (dacli serves the spec as reference) and MCP URI (dedicated framework guidance server, referenced by MCP server ID) +.. `get_metadata()` per-root breakdown + +. Phase — Ecosystem Integration + +.. Integration with ADR-007 (SQLite) for persistent multi-root index +.. Integration with #265 (RAG) for cross-root semantic search +.. Cross-root dependency analysis (e.g., add-on references base product API) +.. Cross-root documentation quality validation: detect mounted reference namespaces that are never referenced in the workspace's documentation content, providing a signal for potentially missing context in framework chapters (Scope, Building Blocks, Constraints, ...) + +==== Resolved Questions + +CLI tool support:: Added in Phase 1. Both `dacli` CLI and `dacli-mcp` support multi-root from the start. Anything else would be service degradation — the documentation positions CLI as "the new way to go." + +URI schemes:: Out of scope for this ADR. Each URI scheme (`smb://`, `https://`, `dav://`, ...) should be a dedicated feature request (introduce req42 to this little project) or ADR when the need arises. Phase 1 supports local paths only (`file:` implicit). + +Role detection strategy:: Well-known filenames as educated guess (README.md, LLM.md, CLAUDE.md, CHANGELOG.md, TODO.md, INSTALL.md → `project-meta`, everything else → `documentation`). Overridable via `.dacli.json` per root in Phase 2. Covers ~90% of real projects without configuration. + +MCP `spec` resolution:: `spec=` references an MCP server ID when available. If the MCP server is reachable, the LLM uses it for on-demand framework guidance. If not, the LLM falls back to its own knowledge. dacli does not resolve or proxy the MCP connection — it passes the server ID through in `get_namespaces` and the LLM decides. + +==== Remaining Open Questions + +. **`.dacli.json` schema:** What fields should the per-root config file support? Candidates: `role` overrides, `base_url`, namespace alias, `spec` defaults. Should it be JSON or TOML? + +==== Related Issues + +* #185 — SQLite Index (persistent multi-root index) +* #265 — RAG/sqlite-vec (cross-root semantic search) +* #15 — File Watching (auto-detect reference changes) diff --git a/src/docs/arc42/chapters/09_architecture_decisions.adoc b/src/docs/arc42/chapters/09_architecture_decisions.adoc index df2ca87..6167a3d 100644 --- a/src/docs/arc42/chapters/09_architecture_decisions.adoc +++ b/src/docs/arc42/chapters/09_architecture_decisions.adoc @@ -64,3 +64,7 @@ include::../adr/ADR-012.adoc[] --- include::../adr/ADR-013.adoc[] + +--- + +include::../adr/ADR-014.adoc[] diff --git a/tests/test_dotted_filenames_266.py b/tests/test_dotted_filenames_266.py index 5f70472..6b02d95 100644 --- a/tests/test_dotted_filenames_266.py +++ b/tests/test_dotted_filenames_266.py @@ -28,7 +28,7 @@ def test_version_numbered_files_have_unique_paths(self, tmp_path): assert len(paths) == len(set(paths)), f"Duplicate paths found: {paths}" def test_cli_context_passes_base_path_to_markdown_parser(self, tmp_path): - """CliContext must pass docs_root as base_path to MarkdownStructureParser.""" + """CliContext must use docs_root as base_path for parsers (Issue #266).""" from dacli.cli import CliContext f1 = tmp_path / "test_v1.2.3.md" @@ -39,8 +39,9 @@ def test_cli_context_passes_base_path_to_markdown_parser(self, tmp_path): output_format="json", pretty=False, ) - # The markdown parser should have base_path set - assert ctx.markdown_parser.base_path == tmp_path + # The index should use relative paths (base_path was correctly set) + section = ctx.index.get_section("test_v1.2.3") + assert section is not None, "Section should be found with dotted filename path" def test_file_prefix_without_base_path_strips_only_known_extensions(self, tmp_path): """Without base_path, only .md extension should be stripped, not version dots.""" diff --git a/tests/test_multi_root.py b/tests/test_multi_root.py new file mode 100644 index 0000000..2e6750f --- /dev/null +++ b/tests/test_multi_root.py @@ -0,0 +1,431 @@ +"""Tests for ADR-014: Multi-Root Documentation Sources (Phase 1). + +Tests cover: +- Root config parsing and validation +- Namespace-prefixed paths in multi-root mode +- Access mode enforcement (reference = read-only) +- get_namespaces tool output +- Document role detection +- Backward compatibility (single-root unchanged) +""" + +from pathlib import Path + +import pytest +from click.testing import CliRunner + +from dacli.cli import cli +from dacli.models import DocumentRoot, detect_document_role +from dacli.root_config import RootConfigError, parse_root_spec, resolve_roots + + +# --- Document role detection --- + + +class TestDocumentRoleDetection: + """Test detect_document_role for well-known filenames.""" + + @pytest.mark.parametrize( + "filename,expected_role", + [ + ("README.md", "project-meta"), + ("readme.adoc", "project-meta"), + ("LLM.md", "project-meta"), + ("CLAUDE.md", "project-meta"), + ("CHANGELOG.md", "project-meta"), + ("TODO.md", "project-meta"), + ("INSTALL.adoc", "project-meta"), + ("ROADMAP.md", "project-meta"), + ("AGENTS.md", "project-meta"), + ("architecture.adoc", "documentation"), + ("api-spec.md", "documentation"), + ("index.adoc", "documentation"), + ("01_introduction.adoc", "documentation"), + ], + ) + def test_role_detection(self, filename, expected_role): + assert detect_document_role(Path(filename)) == expected_role + + +# --- Root config parsing --- + + +class TestParseRootSpec: + """Test parse_root_spec key=value parsing.""" + + def test_parse_minimal_spec(self, tmp_path): + root = parse_root_spec(f"name=my-docs,path={tmp_path}", "workspace") + assert root.name == "my-docs" + assert root.path == tmp_path + assert root.mode == "workspace" + assert root.doc_type is None + + def test_parse_spec_with_type(self, tmp_path): + root = parse_root_spec(f"name=my-docs,path={tmp_path},type=arc42", "reference") + assert root.doc_type == "arc42" + assert root.mode == "reference" + + def test_reject_unknown_keys(self, tmp_path): + with pytest.raises(RootConfigError, match="Unknown key"): + parse_root_spec(f"name=x,path={tmp_path},foo=bar", "workspace") + + def test_reject_missing_name(self, tmp_path): + with pytest.raises(RootConfigError, match="Missing required"): + parse_root_spec(f"path={tmp_path}", "workspace") + + def test_reject_missing_path(self): + with pytest.raises(RootConfigError, match="Missing required"): + parse_root_spec("name=x", "workspace") + + def test_reject_duplicate_key(self, tmp_path): + with pytest.raises(RootConfigError, match="Duplicate key"): + parse_root_spec(f"name=x,name=y,path={tmp_path}", "workspace") + + def test_reject_invalid_format(self): + with pytest.raises(RootConfigError, match="Invalid key=value"): + parse_root_spec("name_without_equals", "workspace") + + +class TestResolveRoots: + """Test resolve_roots validation and backward compat.""" + + def test_default_cwd_workspace(self): + roots = resolve_roots() + assert len(roots) == 1 + assert roots[0].mode == "workspace" + assert roots[0].path == Path.cwd().resolve() + + def test_docs_root_single_workspace(self, tmp_path): + roots = resolve_roots(docs_root=tmp_path) + assert len(roots) == 1 + assert roots[0].name == tmp_path.name + assert roots[0].mode == "workspace" + + def test_multi_root(self, tmp_path): + ws = tmp_path / "ws" + ref = tmp_path / "ref" + ws.mkdir() + ref.mkdir() + roots = resolve_roots( + workspaces=[f"name=ws,path={ws}"], + references=[f"name=ref,path={ref}"], + ) + assert len(roots) == 2 + assert roots[0].mode == "workspace" + assert roots[1].mode == "reference" + + def test_reject_docs_root_with_workspace(self, tmp_path): + ws = tmp_path / "ws" + ws.mkdir() + with pytest.raises(RootConfigError, match="Cannot combine"): + resolve_roots( + workspaces=[f"name=ws,path={ws}"], + docs_root=tmp_path, + ) + + def test_reject_namespace_collision(self, tmp_path): + ws = tmp_path / "ws" + ref = tmp_path / "ref" + ws.mkdir() + ref.mkdir() + with pytest.raises(RootConfigError, match="Namespace collision"): + resolve_roots( + workspaces=[f"name=same,path={ws}"], + references=[f"name=same,path={ref}"], + ) + + def test_reject_nonexistent_path(self, tmp_path): + with pytest.raises(RootConfigError, match="does not exist"): + resolve_roots(workspaces=[f"name=x,path={tmp_path}/nonexistent"]) + + +# --- Multi-root integration --- + + +@pytest.fixture +def multi_root_dirs(tmp_path): + """Create workspace and reference doc roots with test content.""" + ws_dir = tmp_path / "workspace" + ws_dir.mkdir() + (ws_dir / "guide.adoc").write_text( + "= User Guide\n\n== Getting Started\n\nWelcome.\n\n=== Installation\n\nRun pip install.\n", + encoding="utf-8", + ) + (ws_dir / "README.md").write_text("# Readme\n\nProject description.\n", encoding="utf-8") + + ref_dir = tmp_path / "reference" + ref_dir.mkdir() + (ref_dir / "api.adoc").write_text( + "= API Reference\n\n== Endpoints\n\nGET /items\n", + encoding="utf-8", + ) + + return ws_dir, ref_dir + + +class TestMultiRootCLI: + """Test multi-root behavior through the CLI.""" + + def test_namespaces_command(self, multi_root_dirs): + ws_dir, ref_dir = multi_root_dirs + runner = CliRunner() + result = runner.invoke( + cli, + [ + "--workspace", f"name=myapp,path={ws_dir}", + "--reference", f"name=api-ref,path={ref_dir}", + "--format", "json", + "namespaces", + ], + ) + assert result.exit_code == 0 + import json + data = json.loads(result.output) + assert data["total_namespaces"] == 2 + names = [ns["name"] for ns in data["namespaces"]] + assert "myapp" in names + assert "api-ref" in names + + # Check modes + ns_map = {ns["name"]: ns for ns in data["namespaces"]} + assert ns_map["myapp"]["mode"] == "workspace" + assert ns_map["api-ref"]["mode"] == "reference" + + def test_namespace_prefixed_paths(self, multi_root_dirs): + ws_dir, ref_dir = multi_root_dirs + runner = CliRunner() + result = runner.invoke( + cli, + [ + "--workspace", f"name=myapp,path={ws_dir}", + "--reference", f"name=api-ref,path={ref_dir}", + "--format", "json", + "structure", "--max-depth", "0", + ], + ) + assert result.exit_code == 0 + import json + data = json.loads(result.output) + paths = [s["path"] for s in data["sections"]] + # All paths should have namespace prefix + assert any(p.startswith("myapp:") for p in paths) + assert any(p.startswith("api-ref:") for p in paths) + + def test_read_from_reference(self, multi_root_dirs): + ws_dir, ref_dir = multi_root_dirs + runner = CliRunner() + result = runner.invoke( + cli, + [ + "--workspace", f"name=myapp,path={ws_dir}", + "--reference", f"name=api-ref,path={ref_dir}", + "section", "api-ref:api:endpoints", + ], + ) + assert result.exit_code == 0 + assert "GET /items" in result.output + + def test_write_to_reference_rejected(self, multi_root_dirs): + ws_dir, ref_dir = multi_root_dirs + runner = CliRunner() + result = runner.invoke( + cli, + [ + "--workspace", f"name=myapp,path={ws_dir}", + "--reference", f"name=api-ref,path={ref_dir}", + "update", "api-ref:api:endpoints", + "--content", "hacked", + ], + ) + assert result.exit_code != 0 + assert "read-only reference" in result.output + + def test_insert_to_reference_rejected(self, multi_root_dirs): + ws_dir, ref_dir = multi_root_dirs + runner = CliRunner() + result = runner.invoke( + cli, + [ + "--workspace", f"name=myapp,path={ws_dir}", + "--reference", f"name=api-ref,path={ref_dir}", + "insert", "api-ref:api:endpoints", + "--position", "after", + "--content", "hacked", + ], + ) + assert result.exit_code != 0 + assert "read-only reference" in result.output + + def test_write_to_workspace_allowed(self, multi_root_dirs): + ws_dir, ref_dir = multi_root_dirs + runner = CliRunner() + result = runner.invoke( + cli, + [ + "--workspace", f"name=myapp,path={ws_dir}", + "--reference", f"name=api-ref,path={ref_dir}", + "--format", "json", + "update", "myapp:guide:getting-started", + "--content", "Updated content.", + ], + ) + assert result.exit_code == 0 + import json + data = json.loads(result.output) + assert data["success"] is True + + def test_search_across_roots(self, multi_root_dirs): + ws_dir, ref_dir = multi_root_dirs + runner = CliRunner() + result = runner.invoke( + cli, + [ + "--workspace", f"name=myapp,path={ws_dir}", + "--reference", f"name=api-ref,path={ref_dir}", + "--format", "json", + "search", "Endpoints", + ], + ) + assert result.exit_code == 0 + import json + data = json.loads(result.output) + assert data["total_results"] >= 1 + # Result should come from reference namespace + assert any("api-ref:" in r["path"] for r in data["results"]) + + def test_document_roles(self, multi_root_dirs): + ws_dir, _ = multi_root_dirs + runner = CliRunner() + result = runner.invoke( + cli, + [ + "--docs-root", str(ws_dir), + "--format", "json", + "namespaces", + ], + ) + assert result.exit_code == 0 + import json + data = json.loads(result.output) + docs = data["namespaces"][0]["documents"] + roles = {d["slug"]: d["role"] for d in docs} + assert roles["readme"] == "project-meta" + assert roles["guide"] == "documentation" + + +# --- Single-root backward compatibility --- + + +class TestSingleRootBackwardCompat: + """Verify --docs-root behavior is unchanged.""" + + def test_docs_root_no_namespace_prefix(self, multi_root_dirs): + ws_dir, _ = multi_root_dirs + runner = CliRunner() + result = runner.invoke( + cli, + [ + "--docs-root", str(ws_dir), + "--format", "json", + "structure", "--max-depth", "0", + ], + ) + assert result.exit_code == 0 + import json + data = json.loads(result.output) + paths = [s["path"] for s in data["sections"]] + # No namespace prefix in single-root mode + assert all(":" not in p or p.count(":") == 0 or "/" in p.split(":")[0] or p.split(":")[0].islower() for p in paths) + # Specifically: paths should NOT start with "workspace:" + assert not any(p.startswith("workspace:") for p in paths) + + def test_namespaces_single_root(self, multi_root_dirs): + ws_dir, _ = multi_root_dirs + runner = CliRunner() + result = runner.invoke( + cli, + [ + "--docs-root", str(ws_dir), + "--format", "json", + "namespaces", + ], + ) + assert result.exit_code == 0 + import json + data = json.loads(result.output) + assert data["total_namespaces"] == 1 + assert data["namespaces"][0]["mode"] == "workspace" + + +# --- Normalize path in multi-root --- + + +class TestNormalizePathMultiRoot: + """Test normalize_path with multi_root flag.""" + + def test_two_colons_valid_in_multi_root(self): + from dacli.structure_index import StructureIndex + path = "ns:file:section" + normalized, had_extra = StructureIndex.normalize_path(path, multi_root=True) + assert normalized == "ns:file:section" + assert had_extra is False + + def test_two_colons_normalized_in_single_root(self): + from dacli.structure_index import StructureIndex + path = "file:section:subsection" + normalized, had_extra = StructureIndex.normalize_path(path, multi_root=False) + assert normalized == "file:section.subsection" + assert had_extra is True + + def test_three_colons_normalized_in_multi_root(self): + from dacli.structure_index import StructureIndex + path = "ns:file:section:sub" + normalized, had_extra = StructureIndex.normalize_path(path, multi_root=True) + assert normalized == "ns:file:section.sub" + assert had_extra is True + + +# --- Parse path components --- + + +class TestParsePathComponents: + """Test parse_path_components for all formats.""" + + def test_single_root_file_section(self): + from dacli.structure_index import StructureIndex + ns, file, section = StructureIndex.parse_path_components("guides/install:prerequisites") + assert ns is None + assert file == "guides/install" + assert section == "prerequisites" + + def test_multi_root_namespace_file_section(self): + from dacli.structure_index import StructureIndex + ns, file, section = StructureIndex.parse_path_components("myapp:guides/install:prerequisites") + assert ns == "myapp" + assert file == "guides/install" + assert section == "prerequisites" + + def test_one_colon_ambiguous(self): + """With 1 colon, parse_path_components can't distinguish namespace:file + from file:section. It defaults to single-root (file:section) interpretation. + Multi-root paths with sections always have 2 colons.""" + from dacli.structure_index import StructureIndex + ns, file, section = StructureIndex.parse_path_components("myapp:guides/install") + # 1 colon = single-root interpretation (file:section) + assert ns is None + assert file == "myapp" + assert section == "guides/install" + + def test_file_only_with_slash(self): + from dacli.structure_index import StructureIndex + ns, file, section = StructureIndex.parse_path_components("guides/install") + assert ns is None + assert file == "guides/install" + assert section == "" + + def test_legacy_section_only(self): + from dacli.structure_index import StructureIndex + ns, file, section = StructureIndex.parse_path_components("introduction") + assert ns is None + assert file == "" + assert section == "introduction" diff --git a/tests/test_project_setup.py b/tests/test_project_setup.py index 7e296fb..3ac30d8 100644 --- 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