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Docker, Jp notebook configurations #15

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Merged
kuanb merged 12 commits into from
Feb 16, 2018
Merged

Docker, Jp notebook configurations #15

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bac9d4e
update makefile to make graph-tool nb
kuanb Dec 27, 2017
c23ac2b
udpate fiona version
kuanb Dec 27, 2017
c1b1b01
jupyter notebook configuration
kuanb Dec 27, 2017
5d9f120
update the docker configuration for jupyter
kuanb Dec 27, 2017
dab2620
docker clean step
kuanb Jan 6, 2018
4470137
update port configuation for notebook
kuanb Jan 6, 2018
c987803
whole build script for the Docker image
kuanb Jan 6, 2018
25ba10d
add jupyter reqs, separate out base from rest of Dockerfile
kuanb Jan 7, 2018
2245e73
update gcc51 on edsri gdb to address gdal compile issues
kuanb Jan 9, 2018
ea45bdd
now refer to new Docker base image
kuanb Jan 10, 2018
9a4c0ef
get dollar sign in
kuanb Jan 10, 2018
a202d21
update deps
kuanb Jan 10, 2018
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8 changes: 8 additions & 0 deletions Dockerfile
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FROM calthorpeanalytics/python3-geo:3.6.3-1.0.0
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@kuanb kuanb Dec 27, 2017

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Will need to update this to use a publicly accessible image (!). Basically, same as the one I created and submitted here: UDST/urbanaccess#18


RUN mkdir -p /provisioning/peartree
COPY . /provisioning/peartree

# can now install Peartree via repo
RUN cd /provisioning/peartree && \
pip install .
9 changes: 7 additions & 2 deletions Makefile
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test:
it test:
PYTHONPATH=. MPLBACKEND="agg" coverage run --source peartree -m py.test --verbose

performance:
PYTHONPATH=. MPLBACKEND="agg" pytest profiler/test_graph_assembly.py -s
PYTHONPATH=. MPLBACKEND="agg" pytest profiler/test_graph_assembly.py -s

notebook:
docker pull tiagopeixoto/graph-tool
# Will need to then run this: jupyter notebook --ip 0.0.0.0
docker run -p 8888:8888 -p 6006:6006 -it -u user -w /home/user tiagopeixoto/graph-tool bash
16 changes: 16 additions & 0 deletions docker-compose.yml
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version: "1"

services:

# Jupyter Notebook
notebook:
build:
context: .
env_file: .env
command: jupyter notebook --config jupyter_notebook_config.py
volumes:
- .:/code
- /tmp:/tmp
ports:
- "9898:9898"
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