From 1d2252dbe532c38b165a2e65a822eb3feca5ff75 Mon Sep 17 00:00:00 2001 From: "James A. Fellows Yates" Date: Tue, 30 Jun 2026 09:30:55 +0200 Subject: [PATCH] Revise TODO comments for resource requests Updated TODO comments to clarify resource adjustments for the pipeline. --- nf_core/pipeline-template/conf/base.config | 7 +++++-- 1 file changed, 5 insertions(+), 2 deletions(-) diff --git a/nf_core/pipeline-template/conf/base.config b/nf_core/pipeline-template/conf/base.config index 4d9519d8fd..468d48ee19 100644 --- a/nf_core/pipeline-template/conf/base.config +++ b/nf_core/pipeline-template/conf/base.config @@ -24,8 +24,7 @@ process { // These labels are used and recognised by default in DSL2 files hosted on nf-core/modules. // If possible, it would be nice to keep the same label naming convention when // adding in your local modules too. - // TODO nf-core: Customise requirements for specific processes. - // See https://www.nextflow.io/docs/latest/config.html#config-process-selectors + // TODO nf-core: adjust all CPU, memory, and time resource requests to work with 'average' data for the pipeline withLabel:process_single { cpus = { 1 } memory = { 6.GB * task.attempt } @@ -66,4 +65,8 @@ process { ext.use_gpu = { workflow.profile.contains('gpu') } accelerator = { workflow.profile.contains('gpu') ? 1 : null } } + + // TODO nf-core: If required, customise requirements for specific processes using the withName selector + // See https://www.nextflow.io/docs/latest/config.html#config-process-selectors + }