paperbee/pyproject.toml at main · theislab/paperbee · GitHub

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[tool.poetry]
name = "PaperBee"
version = "1.2.1"
description = ""
authors = ["Daniele Lucarelli <daniele.lucarelli@tum.de>", "Vladimir Shitov <vladimir.shitov@helmholtz-munich.de>"]
repository = "https://github.com/theislab/paperbee"
documentation = "https://github.com/theislab/paperbee"
readme = "README.md"
packages = [{ include = "PaperBee", from = "src" }]


[tool.poetry.dependencies]
python = ">=3.10,<4.0"
gspread = "6.0.2"
slack-bolt = "1.18.1"
slack_sdk = "3.27.1"
python-telegram-bot = "21.1.1"
findpapers = "0.6.7"
oauth2client = "4.1.3"
pandas = "2.2.3"
openai = "1.50.2"
defusedxml = "^0.7.1"
zulip = "0.9.0"
ollama = "0.4.6"
pyyaml = "6.0.2"
mattermostdriver = "^7.3.0"
python-editor = "1.0.4"

[tool.poetry.group.dev.dependencies]
pytest = ">=8.2,<9"
pytest-asyncio = "0.26.0"
mypy = "^1.5.1"
pre-commit = "^3.4.0"
types-toml = "^0.10.8.20240310"
types-pyyaml = "^6.0.12.20240808"
types-requests = "^2.32.0.20240914"
pandoc = "2.4"

[tool.poetry.group.docs.dependencies]
mkdocs = "^1.4.2"
mkdocs-material = "^9.2.7"
mkdocstrings = {extras = ["python"], version = "^0.23.0"}
griffe = "^1.1.1"

[build-system]
requires = ["poetry-core>=1.0.0", "cython"]
build-backend = "poetry.core.masonry.api"

[tool.mypy]
files = ["src/PaperBee"]
exclude = ['src/PaperBee/listeners', 'src/PaperBee/app.py']
ignore_missing_imports = true
disallow_untyped_defs = true
disallow_untyped_calls = true
disallow_any_unimported = false
no_implicit_optional = true
check_untyped_defs = true
warn_return_any = true
warn_unused_ignores = true
show_error_codes = true
allow_untyped_globals = false
allow_redefinition = false

[tool.poetry.scripts]
paperbee = "PaperBee.daily_posting:main"

[tool.pytest.ini_options]
testpaths = ["tests"]

[tool.ruff]
target-version = "py37"
line-length = 120
fix = true
select = [
    # flake8-2020
    "YTT",
    # flake8-bandit
    "S",
    # flake8-bugbear
    "B",
    # flake8-builtins
    "A",
    # flake8-comprehensions
    "C4",
    # flake8-debugger
    "T10",
    # flake8-simplify
    "SIM",
    # isort
    "I",
    # mccabe
    "C90",
    # pycodestyle
    "E", "W",
    # pyflakes
    "F",
    # pygrep-hooks
    "PGH",
    # pyupgrade
    "UP",
    # ruff
    "RUF",
    # tryceratops
    "TRY",
]
ignore = [
    # LineTooLong
    "E501",
    # DoNotAssignLambda
    "E731",
    # Generator
    "S311"

]

[tool.ruff.format]
preview = true

[tool.ruff.per-file-ignores]
"tests/*" = ["S101"]