Refactor samplesheet to handle multiple treatments & controls - #44

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kelly-sovacool wants to merge 8 commits into

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Commits on May 23, 2024

fix: update groovy code for running spooker from champagne
kelly-sovacool
committed
fc8c81a
fix: biowulf has depreceated SLURM_JOBID in favor of SLURM_JOB_ID
kelly-sovacool
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85701a7
feat!: handle multiple treatments & controls in samplesheet check
kelly-sovacool
committed
9ee42ba
fix: reduce stringency of fastq extension
kelly-sovacool
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944de4f
chore: note that onComplete should create log dir if DNE
kelly-sovacool
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57d21ef
feat: [WIP] combine treatments & controls into one channel
kelly-sovacool
committed
f176e55

Commits on May 28, 2024

fix: run processes after mageck count once per control
kelly-sovacool
committed
79d74b2

Commits on Sep 12, 2024

Merge branch 'main' into iss-41
kelly-sovacool
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cb844e8