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61 changes: 61 additions & 0 deletions _pkgdown.yml
Original file line number Diff line number Diff line change
Expand Up @@ -2,3 +2,64 @@ url: https://fredhutch.github.io/VISCfunctions/
template:
bootstrap: 5

navbar:
structure:
left:
- home
- functions # replaces "reference"
- vignettes # replaces "articles"
- news # replaces "changelog"
components:
functions:
text: "Functions and Datasets"
desc: "All fuunctions and datasets made available by VISCfunctions"
href: reference/index.html
vignettes:
text: "Vignettes"
href: articles/index.html
news:
text: "News"
href: news/index.html


reference:
- title: "Statistical Tests"
desc: "Formal hypothesis testing and p-value computations"
contents:
- two_samp_bin_test
- two_samp_cont_test
- cor_test
- pairwise_test_bin
- pairwise_test_cont
- cor_test_pairs
- binom_ci
- wilson_ci

- title: "Survival and Magnitude Breadth"
contents:
- create_step_curve
- mb_results
- trapz_sorted

- title: "Output Formatting for PDF and Word"
contents:
- paste_tbl_grp
- pretty_pvalues
- stat_paste
- escape
- collapse_group_row
- round_away_0

- title: "Utility Functions"
contents:
- get_full_name
- get_session_info
- shorten_git_hash

- title: "Example Datasets"
contents:
- exampleData_BAMA
- exampleData_ICS
- exampleData_NAb
- CAVD812_mAB
- G001_Bcell_flow_seq_PBMC