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Add headless exportAMRVisualizations() to render all dashboard figures as pdf, png, jpg, or svg without running the app #41

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Merged
eboyer221 merged 8 commits into from
Jul 31, 2026
Merged

Add headless exportAMRVisualizations() to render all dashboard figures as pdf, png, jpg, or svg without running the app #41

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39d29f5
Add headless exportAMRVisualizations() to render all dashboard figures
eboyer221 Jul 23, 2026
7e5c17e
Style code (GHA)
eboyer221 Jul 23, 2026
0b548b7
removing warnings from testing export
amcim Jul 27, 2026
b0c37d1
Add adjustable feature counts (top_n_features, network_top_n) to export
eboyer221 Jul 28, 2026
506de07
Fit exported network SVG to container via onRender
amcim Jul 28, 2026
5ddd6b5
file format consistency, whitespace trim, no image cutoff
amcim Jul 30, 2026
d4c2afa
Adding JS which strips title from non-plotly svg
amcim Jul 30, 2026
377fd79
Sync export docs, declare Chrome in SystemRequirements
eboyer221 Jul 30, 2026
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2 changes: 2 additions & 0 deletions DESCRIPTION
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Expand Up @@ -46,11 +46,13 @@ Imports:
Suggests:
BiocStyle,
chromote,
htmlwidgets,
knitr,
rmarkdown,
shinytest2,
spelling,
testthat (>= 3.0.0),
webshot2,
withr
VignetteBuilder: knitr
biocViews:
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1 change: 1 addition & 0 deletions NAMESPACE
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@@ -1,5 +1,6 @@
# Generated by roxygen2: do not edit by hand

export(exportAMRVisualizations)
export(launchAMRDashboard)
import(shiny)
importFrom(DT,datatable)
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