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MPUSP / snakemake-assembly-postprocessing Public

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feat: added RGI for AMR detection + bug fix#13

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m-jahn wants to merge 4 commits intomainMPUSP/snakemake-assembly-postprocessing:mainfrom

devMPUSP/snakemake-assembly-postprocessing:devCopy head branch name to clipboard

Conversation Commits4 (4)Checks Files changed

Open

feat: added RGI for AMR detection + bug fix#13
m-jahn wants to merge 4 commits intomainfrom
dev

Commits

Commits on Apr 17, 2026

fix: add missing targets to run annotation when tool is specified
m-jahn
committed
feat: add RGI for AMR detection
m-jahn
committed
fix: snakefmt error
m-jahn
committed
fix: need separate dirs for results because intermediate files do have non-unique names
m-jahn
committed

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