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Find protease sites#178

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vbrennsteiner wants to merge 5 commits intomainfrom
find_protease_sites
Open

Find protease sites#178
vbrennsteiner wants to merge 5 commits intomainfrom
find_protease_sites

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@vbrennsteiner vbrennsteiner commented Feb 17, 2026

Reason for this PR:

Peptidomics experiments frequently deal with the question of digestion efficiency and missed cleavage sites. A simple function to search for a regular expression cleavage pattern expedites QC workflows in peptidomics experiments. For example, shorter or longer tryptic digests result in a different number of miscleavages:

image

This PR could be the foundation for implementing a standardized QC-plot to assess digestion efficiency with barplots in the future.

@lucas-diedrich lucas-diedrich added enhancement New feature or request labels Feb 27, 2026
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