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Service integration draft PR #1621

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03dfb9a
start module
joehcollins Apr 23, 2025
1054d08
start module
joehcollins Apr 23, 2025
b49df1b
start module
joehcollins Apr 23, 2025
6f5cc88
add sheet for Chronic_care.csv
tdm32 Apr 23, 2025
7551783
updates to service_integration module
joehcollins Apr 23, 2025
5c0f05a
updates to service_integration module
joehcollins Apr 23, 2025
af0f7d8
add depression in HIV tx
tdm32 Apr 23, 2025
03c36f0
Merge branch 'refs/heads/jcollins/service_integration' into jcollins/…
tdm32 Apr 23, 2025
deb27d7
updates to service_integration module
joehcollins Apr 23, 2025
e76c9c8
updates to service_integration module
joehcollins Apr 23, 2025
b2779af
updates to service_integration module
joehcollins Apr 23, 2025
8e2c032
chronic care:
tdm32 Apr 23, 2025
d48a253
add import statement for HIV HSI in CMD
tdm32 Apr 23, 2025
ca6582b
Merge remote-tracking branch 'origin/jcollins/service_integration_tar…
joehcollins Apr 24, 2025
4897ba8
updates to service_integration module
joehcollins Apr 30, 2025
a055224
updates to service_integration module
joehcollins Apr 30, 2025
d573aba
fix to error in contraception.pyn
joehcollins May 6, 2025
4f89fe2
added comments
joehcollins May 9, 2025
f7dcf1f
update analysis
joehcollins May 12, 2025
11dff37
add in hiv and tb enhanced screening rates
tdm32 May 12, 2025
ddf9938
add note for EPI
tdm32 May 12, 2025
cd90b55
Merge branch 'jcollins/service_integration_tara12May' into jcollins/s…
joehcollins May 13, 2025
a05177e
merged in taras updates, update to scenario file
joehcollins May 13, 2025
462fbd3
fix failing tests
joehcollins May 13, 2025
e8ae74a
fix failing tests
joehcollins May 13, 2025
1367ebb
fix failing tests
joehcollins May 13, 2025
11bd4b3
update to remove use of DATE parameter which cant be updated
joehcollins May 14, 2025
d389fb3
update to analysis scripts
joehcollins May 19, 2025
7b0520a
update to analysis scripts
joehcollins May 21, 2025
5a62299
update to analysis scripts
joehcollins May 21, 2025
a302bbe
fixes to errors
joehcollins Jun 6, 2025
18433ee
update to analysis script
joehcollins Jun 10, 2025
1f48cdc
Added functionality to allow for consumable availability to be overri…
joehcollins Jun 10, 2025
20f1135
Merge branch 'jcollins/override_cons_availability_by_treatment_id' in…
joehcollins Jun 10, 2025
d07580e
update to parameter structure, changes to allow max consumables
joehcollins Jun 10, 2025
6b84772
fix to error driven by catagorical variables
joehcollins Jun 11, 2025
0ccbb84
fix to error driven by catagorical variables
joehcollins Jun 11, 2025
31999bb
fixed failing test
joehcollins Jun 11, 2025
c407454
fixed failing test
joehcollins Jun 11, 2025
16166ce
adding in new scenarios, update analysis events in labour.py and preg…
joehcollins Jun 12, 2025
e546f94
Merge branch 'master' into jcollins/service_integration
joehcollins Jun 12, 2025
bda92f8
update to analysis script
joehcollins Jun 12, 2025
2717f6a
make treatment_ids a property of the consumable class instead
joehcollins Jun 12, 2025
6d761ae
add _make_available function to consumables.py
joehcollins Jun 13, 2025
3b52d40
fix failing test
joehcollins Jun 13, 2025
1fcf802
updates
joehcollins Jun 17, 2025
953d0fd
merged in costing model. some updates
joehcollins Jun 18, 2025
f553596
fix to error for tests
joehcollins Jun 18, 2025
c48a898
fix to error for tests
joehcollins Jun 18, 2025
c4fe40f
Merge branch 'jcollins/override_cons_availability_by_treatment_id' in…
joehcollins Jun 19, 2025
644a389
updates
joehcollins Jun 19, 2025
d12b0cb
updates to treatment_ids and analysis script
joehcollins Jun 20, 2025
17e1897
updates to treatment_ids and analysis script
joehcollins Jun 20, 2025
d0d9b40
updates to treatment_ids and analysis script
joehcollins Jun 20, 2025
419b593
Added functionality to provide a set prob of cons availability for a …
joehcollins Jun 23, 2025
e639392
fix error
joehcollins Jun 23, 2025
00003ea
update test calling consumables class
joehcollins Jun 23, 2025
7b8bdb2
linting
joehcollins Jun 23, 2025
8227289
fix failing tests
joehcollins Jun 24, 2025
79c1baa
Merge branch 'jcollins/override_cons_availability_by_treatment_id' in…
joehcollins Jun 24, 2025
c31ba8f
fix failing tests
joehcollins Jun 24, 2025
8abb926
improvements to tests
joehcollins Jun 24, 2025
147fa6f
update chronic care screening
joehcollins Jun 24, 2025
dd82d1e
fix broken tests
joehcollins Jun 25, 2025
aec0078
fix broken tests
joehcollins Jun 27, 2025
60042df
update scenario file
joehcollins Jun 27, 2025
3f29517
update scenario file
joehcollins Jul 15, 2025
7af9c4b
update scenario file
joehcollins Aug 11, 2025
83b5378
update scenario file
joehcollins Aug 18, 2025
a3a8f94
update scenario file
joehcollins Sep 23, 2025
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2 changes: 1 addition & 1 deletion resources/ResourceFile_LabourSkilledBirthAttendance/parameter_values.csv
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2 changes: 1 addition & 1 deletion resources/ResourceFile_PregnancySupervisor/parameter_values.csv
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3 changes: 3 additions & 0 deletions resources/costing/ResourceFile_Consumables_Inflow_Outflow_Ratio.csv
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4 changes: 2 additions & 2 deletions resources/costing/ResourceFile_Costing.xlsx
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3 changes: 3 additions & 0 deletions resources/costing/ResourceFile_Costing_Consumables.csv
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3 changes: 3 additions & 0 deletions resources/costing/ResourceFile_Costing_Equipment.csv
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3 changes: 3 additions & 0 deletions resources/costing/ResourceFile_Costing_Facility_Operations.csv
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3 changes: 3 additions & 0 deletions resources/costing/ResourceFile_Costing_HR.csv
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3 changes: 3 additions & 0 deletions resources/costing/ResourceFile_Exchange_Rates_and_Inflation.csv
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3 changes: 3 additions & 0 deletions resources/costing/ResourceFile_Health_Spending_Projections.csv
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3 changes: 3 additions & 0 deletions resources/costing/ResourceFile_Resource_Mapping.csv
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4 changes: 2 additions & 2 deletions resources/healthsystem/ResourceFile_HealthSystem_parameters.csv
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4 changes: 2 additions & 2 deletions resources/healthsystem/organisation/ResourceFile_Master_Facilities_List.csv
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3 changes: 3 additions & 0 deletions resources/service integration/parameter_values.csv
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