BSA-Seq data analysis - Python implementation of the allele frequency method
This is the Python implementation of the allele frequency method for BSA-Seq data analysis. The script can be tested by issuing the command python PySNPIndex.py in a terminal. The file snp_final.tsv.bz2 needs to be uncompressed to the working directory before testing. Options as in PyBSASeq are needed to use the script for your own SNP datasets.