Update to new jzarr 0.4.2

[melissalinkert]

Corresponds to glencoesoftware/bioformats2raw#203

[melissalinkert]

I think the build failure is expected until glencoesoftware/bioformats2raw#203 is released and the bioformats2raw version is updated here.

[sbesson]

I think the build failure is expected until glencoesoftware/bioformats2raw#203 is released and the bioformats2raw version is updated here.

Agreed, although the fact that the GitHub workflow builds did not fail is a slight concern as it's performing the same build.
Could you try removing

raw2ometiff/.github/workflows/build.yml

Line 26 in 6cd57d7

cache: "gradle"

to see if it's a side-effect of the caching?

[sbesson]

The last commit consuming the 0.8.0-rc1 release candidate of bioformat2raw fixes the GitHub Actions build and also updates the usage of the listener API to match the backwards-incompatible changes introduced in glencoesoftware/bioformats2raw#221.

Tested functionally on a handful of samples of different modalities (WSI, multi-dimensional fluorescence). Let's get this merged to align the low-level Zarr library used across these converted utilities