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mrc-ide / covid-sim Public

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Create Vector2 Struct#325

Draft

CloneDeath wants to merge 81 commits into

mrc-ide:mastermrc-ide/covid-sim:masterfrom

CloneDeath:create-location-structCloneDeath/covid-sim:create-location-structCopy head branch name to clipboard

Conversation Commits81 (81)Checks Files changed

Draft

Create Vector2 Struct#325
CloneDeath wants to merge 81 commits into
mrc-ide:masterfrom
CloneDeath:create-location-struct

Commits

Commits on May 28, 2020

Added Location.
CloneDeath
committed
Replaced locations in the models with the Location struct.
CloneDeath
committed
Added distance_to and distance_squared_to functions for location.
CloneDeath
committed
Replaced dist2UTM usage in function for distance between people.
CloneDeath
committed
Moved Household struct into its own file.
CloneDeath
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Added distance functions to Household.
CloneDeath
committed
Updated dist2 for Persons to use the household distance function.
CloneDeath
committed
Added constructor for Location, and fixed loading location into Airports.
CloneDeath
committed
Moved Location and MicroCellPosition to Coordinates directory.
CloneDeath
committed
Added Vector2<T> to handle common x/y. Made Location and MicroCellPosition inherit from Vector2.
CloneDeath
committed
Added length member to Vector2, and fixed compilation issue in Dist.cpp.
CloneDeath
committed
Replaced some xy pairs with Vector2s.
CloneDeath
committed
Added Size class, and simplified how Coordinates files are included in the compile.
CloneDeath
committed
Added area and dimensions to the Size struct. Replaced some variables with the new struct.
CloneDeath
committed
Renamed some variables in dist2_cc to clarify that we are working with cell indexes.
CloneDeath
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Fixed type of x and y in dist2_cc to be double instead of int.
CloneDeath
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Moved Cell struct to its own file.
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Added index() and position() functions to Cell.
CloneDeath
committed
Renamed hpp extensions to h.
CloneDeath
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Renamed hpp extensions to h.
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committed
Replaced dist2_cc with distance_squared_to inside of Cell class.
CloneDeath
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Moved dist2_cc_min to a Cell function.
CloneDeath
committed
Moved Microcell and IndexList out of Model.h
CloneDeath
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Added contains function to Size to see if a Vector2 is inside of it. Used funciton in Bitmap.cpp.
CloneDeath
committed
Moved dist2_mm to Microcell function.
CloneDeath
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Fixed Microcell::distance_squared_to to use Vector2 math.
CloneDeath
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Removed redundant disance_squared_to logic in Cell and Microcell, since UTM coordinates are already taken into account in Vector2.
CloneDeath
committed
Updated Bitmap.cpp to use Vector math.
CloneDeath
committed
Fixed some compilation issues in Bitmap and CovidSim.cpp.
CloneDeath
committed
Added files for Airport class, and gave it a distance_to function. Updated some usages of Airplane distances to use vector math.
CloneDeath
committed
Added some math functions to Size, and simplified equations in SetupModel.cpp
CloneDeath
committed
Added BoundingBox class.
CloneDeath
committed
Added start and end to BoundingBox, and fixed the math in distUTM to use vector math.
CloneDeath
committed
Fixed some BoundingBox related compilation issues.
CloneDeath
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Converted some BoundingBox math to use Vector math.
CloneDeath
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Modified functions in Size and Vector2 to take in const references instead of copies.
CloneDeath
committed
Fixed some setup for the bounding boxes.
CloneDeath
committed
Added contains to BoundingBox, and used it.
CloneDeath
committed
Added distance_to(Place) to Hoseholds.
CloneDeath
committed
Fixed += and -= operators in Vector2 to return a reference.
CloneDeath
committed
Updated some dist2_raw to use distance_squared_to
CloneDeath
committed
Updated some more usages of dist2_raw to use distance_squared_to.
CloneDeath
committed
Removed Location class.
CloneDeath
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Removed remaining usages of Location and replaced with Vector2<float>
CloneDeath
committed
Removed single argument constructor from Vector2 and Size.
CloneDeath
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Replaced LocationInitialInfection array with positional data to an array of Vector2<double>.
CloneDeath
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Replaced some Vector math in DoImmune.
CloneDeath
committed
Moved x and y closer to their usage.
CloneDeath
committed
Replaced some more code to use Vector math.
CloneDeath
committed
Some more setup error fixing.
CloneDeath
committed
Fixed some initialization of infectee_position.
CloneDeath
committed
Split up k and l variables into their usages, and renamed some of them.
CloneDeath
committed
Replaced DomainSize with just Size<double>.
CloneDeath
committed
Moved several x,y pairs closer to their usage.
CloneDeath
committed
Simplified several bitmap vector math equations.
CloneDeath
committed
Replaced the get_number_of_microcells_high/wide functions with number_of_microcells() that returns a Size.
CloneDeath
committed
Added size() to bounding box, and refactored some more vector math.
CloneDeath
committed
Updated several vector math initializators.
CloneDeath
committed
Added distance_to to Cell, and updated some math to use it.
CloneDeath
committed
Renamed usage of k to a bool found;
CloneDeath
committed
Fixed some compilation issues in Cell.
CloneDeath
committed
Fixed some compilation issues in SetupModel.
CloneDeath
committed
Replaced old get_number_of_micro_cells_high() with new number_of_micro_cells().height.
CloneDeath
committed
Updated usages of nch with number_of_cells.height.
CloneDeath
committed
Fixed several compilation issues.
CloneDeath
committed
Changed distance_to in Airport to take in a ref instead of a ptr.
CloneDeath
committed
Fixed additional compilation issues.
CloneDeath
committed
Moved template definitions into their header.
CloneDeath
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Moved model classes into Models directory.
CloneDeath
committed
Added CMakeLists.txt for Models directory, and included it in src makelist.
CloneDeath
committed
Moved Person to their own files, and updated usages.
CloneDeath
committed
Fixed some includes, and references to dist2_mm.
CloneDeath
committed
Changed distance_squared_to to distance_to_squared.
CloneDeath
committed
Renamed Coordinates directory to Geometry.
CloneDeath
committed
Moved Geometry classes into Geometry namespace.
CloneDeath
committed
Moved Model classes into Models namespace.
CloneDeath
committed
Fixed compilation issue with SpatialBoundingBox.
CloneDeath
committed
Added std to abs/fabs in Cell.cpp.
CloneDeath
committed
Trying cstdlib to fix abs compilation issue on mac.
CloneDeath
committed
Switched out cmath with cstdlib in Microcell.cpp to fix compilation issue on Mac.
CloneDeath
committed
Added CMAKE_CURRENT_LIST_DIR to files in CMakeLists since we're using CMAKE 3.8
CloneDeath
committed

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