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Expanded statistics reporting in SEAHORSE for phenotype-phenotype, ph… - #437

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taraeicher merged 1 commit into
netZoo:develfrom
taraeicher:expandSeahorseStatistics
Sep 11, 2026
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taraeicher merged 1 commit into
netZoo:develfrom
taraeicher:expandSeahorseStatistics

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Expanded statistics to include the following:

  • LIMMA moderated t-statistic for linear regression on expression data
  • t-statistic for linear regression on continuous network features
  • z-statistic for logistic regression on dichotomous network features
  • p-values for correlation between expression and continuous phenotypic data
  • ANOVA F-statistic for association between expression and nominal phenotypic data
  • LIMMA moderated t-statistic for association between expression and dichotomous phenotypic data
  • p-values for correlation between continuous network features and continuous phenotypic data
  • ANOVA F-statistic for association between continuous network features and nominal phenotypic data
  • t-statistic for association between continuous network features and dichotomous phenotypic data
  • t-statistic for association between dichotomous network features and continuous phenotypic data
  • Chi-square statistic for association between dichotomous network features and nominal / dichotomous phenotypic data
  • p-values for correlation between continuous phenotypes
  • t-statistic for association between continuous and nominal phenotypes
  • ANOVA F statistic for association between continuous and dichotomous phenotypes
  • Chi-square statistic for association between nominal / dichotomous phenotypes

…enotype-network, and phenotype-gene associations
@taraeicher
taraeicher merged commit f93c0ac into netZoo:devel Sep 11, 2026
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