speed up merge script when deep pedigrees are present#6168

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lukasmueller wants to merge 10 commits into

topic/speed_up_merge_script

Commits on Jun 18, 2026

when pedigrees are large, the merge function will try to parse the entire pedigree for both parents, which is very slow. It only needs the direct parents. Copied a function from CXGN::Chado::Stock …
lukasmueller
committed
Fix syntax errors
ryan-preble
committed
Add synonyms and variety name to label designer

ryan-preble
authored and
lukasmueller
committed
Remove synonyms from label designer

ryan-preble
authored and
lukasmueller
committed
manage accession lists

ClayBirkett
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lukasmueller
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Manage Accessions: remove list_id query param after adding accessions

dwaring87
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lukasmueller
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add observationUnitDbId to list of valid headers for phenotype upload info

bm743
authored and
lukasmueller
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add observationUnitDbId as valid input for phenotype spreadsheet parser

bm743
authored and
lukasmueller
committed
fix an issue with the get_direct_parents function (accessor get_stock_id should be stock_id).
lukasmueller
committed

Commits on Jun 21, 2026

Merge branch 'master' into topic/speed_up_merge_script
lukasmueller
committed