v1.0.1

[jhollway]

Description

Package

• Updated the logo
• Fixed the error in some flavours by removing environment references in included objects

Plotting

• Closed Themes; please improve colors of curves #44 by adding example that uses ggplot2::scale_colour_discrete() to tweak colour output

Tutorials

• Fixed the tutorial to use netrics functions

Checklist:

• Documentation
  • DESCRIPTION file version is bumped by the appropriate increment (major, minor, patch)
  • Date in DESCRIPTION is correct
  • Longer functions are commented inline or broken down into helper functions to help debugging
• PR form
  • Title indicates expected version number
  • PR description above and the NEWS.md file are aligned
  • Description above itemizes changes under subsection titles, e.g. "## Data""
  • Closed, fixed, or related issues are referenced and explained in the description above, e.g. "Fixed #0 by adding A"

[codecov]

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 56.30%. Comparing base (d330755) to head (c2ee23c).
⚠️ Report is 8 commits behind head on main.

Additional details and impacted files

@@           Coverage Diff           @@
##             main      #53   +/-   ##
=======================================
  Coverage   56.30%   56.30%           
=======================================
  Files          24       24           
  Lines        1920     1920           
=======================================
  Hits         1081     1081           
  Misses        839      839           

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[Copilot]

Pull request overview

Patch release prep for autograph 1.0.1, updating documentation/tutorial materials and bundled data to address a CRAN-related issue and align examples with current dependencies.

Changes:

• Bumped package version/date and updated release notes / CRAN comments for v1.0.1.
• Updated plotting docs/examples (including a new ggplot2 scale example) and tutorial content (netrics function names, fill vs colour scales).
• Added/updated bundled result object ergm_res and regenerated the rendered learnr tutorial HTML.

Reviewed changes

Copilot reviewed 8 out of 14 changed files in this pull request and generated 5 comments.

Show a summary per file

File	Description
man/plot_interp.Rd	Adds an example showing how to tweak colours via an added ggplot2 scale layer.
man/autograph-package.Rd	Updates tutorial launch instructions to use migraph::run_tute().
inst/tutorials/tutorial2/visualisation.html	Re-rendered learnr tutorial output reflecting tutorial/code updates.
inst/tutorials/tutorial2/visualisation.Rmd	Updates tutorial code to new netrics function names and adjusts tutorial content.
data/ergm_res.rda	Adds/updates a bundled ERGM result object (likely re-saved to remove env refs).
cran-comments.md	Updates CRAN submission notes for the fix.
R/plot_interp.R	Adds a roxygen example with an added ggplot2 discrete colour scale.
NEWS.md	Adds v1.0.1 changelog entries.
DESCRIPTION	Bumps Version/Date to 1.0.1.
.gitignore	Ignores .positai.
.Rbuildignore	Ignores .positai and .claude.

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