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build(medcat and medcat-den and medcat-embedding-linker): Fix spacy-click issue #518

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Merged
mart-r merged 5 commits into from
May 29, 2026
+9 −3
Merged

build(medcat and medcat-den and medcat-embedding-linker): Fix spacy-click issue #518

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54c4f5d
Explicitly require click as a dependency to fix spacy issue
github-actions[bot] May 29, 2026
47dddca
Explicitly require click as a dependency to fix spacy issue for medca…
github-actions[bot] May 29, 2026
836a6c5
Explicitly require click as a dependency to fix spacy issue for embed…
github-actions[bot] May 29, 2026
26f5e49
Unify typer install restrictions
github-actions[bot] May 29, 2026
6b4e3ee
Fix typos in comment
github-actions[bot] May 29, 2026
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4 changes: 3 additions & 1 deletion medcat-den/pyproject.toml
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Expand Up @@ -35,7 +35,9 @@ dependencies = [
"diskcache>=5.6.3,<6.0",
# NOTE: transitive dependency that breaks other deps
# e.g `spacy`'s dependency `click` isn't installed
"typer!=0.26.0,!=0.26.1,!=0.26.2",
"typer!=0.26.*",
# transitive dependency that spacy needs but doesn't delcare...
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@jocelyneholdbrook jocelyneholdbrook May 29, 2026 •
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minor - type in declare. same below

"click",
]

[project.optional-dependencies]
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4 changes: 3 additions & 1 deletion medcat-plugins/embedding-linker/pyproject.toml
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Expand Up @@ -61,7 +61,9 @@ dependencies = [
"tqdm",
# NOTE: transitive dependency that breaks other deps
# e.g `spacy`'s dependency `click` isn't installed
"typer!=0.26.0,!=0.26.1,!=0.26.2",
"typer!=0.26.*",
# transitive dependency that spacy needs but doesn't delcare...
"click",
]

# List additional groups of dependencies here (e.g. development
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4 changes: 3 additions & 1 deletion medcat-v2/pyproject.toml
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Expand Up @@ -71,7 +71,9 @@ dependencies = [ # Optional
# TODO - others
# NOTE: transitive dependency that breaks other deps
# e.g `spacy`'s dependency `click` isn't installed
"typer!=0.26.0,!=0.26.1,!=0.26.2",
"typer!=0.26.*",
# transitive dependency that spacy needs but doesn't delcare...
"click",
]

# List additional groups of dependencies here (e.g. development
Expand Down
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