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Numpy array args in register #1227

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StephenThornquist wants to merge 2 commits into from
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Numpy array args in register #1227

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fd0e9b6
Numpy argument handling in register
StephenThornquist Apr 13, 2026
ecabf91
fixed typo
StephenThornquist Apr 13, 2026
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16 changes: 8 additions & 8 deletions suite2p/registration/register.py
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Original file line number Diff line number Diff line change
Expand Up @@ -801,15 +801,15 @@ def assign_reg_io(f_reg, f_raw=None, f_reg_chan2=None,
Tiff output directory for the alternate channel.
"""
if f_reg_chan2 is None or not align_by_chan2:
f_align_in = f_reg if not f_raw else f_raw
f_alt_in = f_reg_chan2 if not f_raw_chan2 else f_raw_chan2
f_align_out = f_reg if f_raw else None
f_alt_out = f_reg_chan2 if f_raw_chan2 else None
f_align_in = f_reg if f_raw is None else f_raw
f_alt_in = f_reg_chan2 if f_raw_chan2 is None else f_raw_chan2
f_align_out = f_reg if f_raw is not None else None
f_alt_out = f_reg_chan2 if f_raw_chan2 is not None else None
else:
f_align_in = f_reg_chan2 if not f_raw_chan2 else f_raw_chan2
f_alt_in = f_reg if not f_raw else f_raw
f_align_out = f_reg_chan2 if f_raw_chan2 else None
f_alt_out = f_reg if f_raw else None
f_align_in = f_reg_chan2 if f_raw_chan2 is None else f_raw_chan2
f_alt_in = f_reg if f_raw is None else f_raw
f_align_out = f_reg_chan2 if f_raw_chan2 is not None else None
f_alt_out = f_reg if f_raw is not None else None

if f_alt_in is not None:
if f_align_in.shape[0] != f_alt_in.shape[0]:
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