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calizilla
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Jul 22, 2026
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calizilla
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Suggested change based on code not testing as I don't have any saved logs to test with :-)
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| echo -e "Job_name\tHash\tLog_path\tExit_status\tService_units\tNCPUs_requested\tCPU_time_used(mins)\tCPU_efficiency\tMemory_requested\tMemory_used\tWalltime_requested\tWalltime_used(mins)\tJobFS_requested\tJobFS_used" > "$OUTPUT" | ||
| echo -e "Job_name\tHash\tLog_path\tExit_status\tService_units\tNCPUs_requested\tCPU_time_used(mins)\tCPU_efficiency\tNGPUs_requested\tGPU_utilisation\tGPU_memory_used\tMemory_requested\tMemory_used\tWalltime_requested\tWalltime_used(mins)\tJobFS_requested\tJobFS_used" > "$OUTPUT" |
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Suggest reordering so that all the CPU details (number, utilisation, memory requested and used) are together, then the 3 new GPU details after. This keeps the NA's if present clustered together
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| print jobname, hash, logfile, exit_status, service_units, ncpus_requested, cpu_time_used_mins, cpu_efficiency, memory_requested, memory_used, walltime_requested, walltime_used_mins, jobfs_requested, jobfs_used | ||
| print jobname, hash, logfile, exit_status, service_units, ncpus_requested, cpu_time_used_mins, cpu_efficiency, ngpus_requested, gpu_utilisation, gpu_memory_used, memory_requested, memory_used, walltime_requested, walltime_used_mins, jobfs_requested, jobfs_used |
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suggest reorder as per above comment
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small patch to include GPU utilisation when reporting usage for a nextflow log. What do you think @calizilla?